CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-014537
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Retinal dehydrogenase 2 
Protein Synonyms/Alias
 RALDH 2; RalDH2; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II) 
Gene Name
 Aldh1a2 
Gene Synonyms/Alias
 Raldh2 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
365EQGPQIDKKQYNKILacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently. 
Sequence Annotation
 NP_BIND 263 268 NAD (By similarity).
 ACT_SITE 286 286 Proton acceptor.
 ACT_SITE 320 320 Nucleophile.
 MOD_RES 119 119 Phosphothreonine (By similarity).
 MOD_RES 122 122 Phosphothreonine (By similarity).  
Keyword
 3D-structure; Complete proteome; Cytoplasm; NAD; Oxidoreductase; Phosphoprotein; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 518 AA 
Protein Sequence
MTSSEIAMPG EVKADPAALM ASLQLLPSPT PNLEIKYTKI FINNEWQNSE SGRVFPVCNP 60
ATGEQVCEVQ EADKVDIDKA VQAARLAFSL GSVWRRMDAS ERGRLLDKLA DLVERDRATL 120
ATMESLNGGK PFLQAFYIDL QGVIKTLRYY AGWADKIHGM TIPVDGDYFT FTRHEPIGVC 180
GQIIPWNFPL LMFTWKIAPA LCCGNTVVIK PAEQTPLSAL YMGALIKEAG FPPGVVNILP 240
GYGPTAGAAI ASHIGIDKIA FTGSTEVGKL IQEAAGRSNL KRVTLELGGK SPNIIFADAD 300
LDYAVEQAHQ GVFFNQGQCC TAGSRIFVEE SIYEEFVKRS VERAKRRIVG SPFDPTTEQG 360
PQIDKKQYNK ILELIQSGVA EGAKLECGGK GLGRKGFFIE PTVFSNVTDD MRIAKEEIFG 420
PVQEILRFKT MDEVIERANN SDFGLVAAVF TNDINKALMV SSAMQAGTVW INCYNALNAQ 480
SPFGGFKMSG NGREMGEFGL REYSEVKTVT VKIPQKNS 518 
Gene Ontology
 GO:0005829; C:cytosol; IDA:RGD.
 GO:0005634; C:nucleus; IEA:Compara.
 GO:0048471; C:perinuclear region of cytoplasm; IDA:RGD.
 GO:0004028; F:3-chloroallyl aldehyde dehydrogenase activity; IEA:Compara.
 GO:0016918; F:retinal binding; IDA:RGD.
 GO:0001758; F:retinal dehydrogenase activity; IDA:RGD.
 GO:0042904; P:9-cis-retinoic acid biosynthetic process; IEA:Compara.
 GO:0009952; P:anterior/posterior pattern specification; IEA:Compara.
 GO:0001568; P:blood vessel development; IEA:Compara.
 GO:0048738; P:cardiac muscle tissue development; IEA:Compara.
 GO:0071300; P:cellular response to retinoic acid; IEA:Compara.
 GO:0009855; P:determination of bilateral symmetry; IEA:Compara.
 GO:0031076; P:embryonic camera-type eye development; IEA:Compara.
 GO:0048566; P:embryonic digestive tract development; IEA:Compara.
 GO:0035115; P:embryonic forelimb morphogenesis; IEA:Compara.
 GO:0060324; P:face development; IEA:Compara.
 GO:0003007; P:heart morphogenesis; IEA:Compara.
 GO:0030902; P:hindbrain development; IEA:Compara.
 GO:0001822; P:kidney development; IEP:RGD.
 GO:0001889; P:liver development; IEP:RGD.
 GO:0030324; P:lung development; IEA:Compara.
 GO:0007494; P:midgut development; IEP:RGD.
 GO:0016331; P:morphogenesis of embryonic epithelium; IEA:Compara.
 GO:0008285; P:negative regulation of cell proliferation; IEA:Compara.
 GO:0014032; P:neural crest cell development; IEA:Compara.
 GO:0021915; P:neural tube development; IEA:Compara.
 GO:0030182; P:neuron differentiation; IEA:Compara.
 GO:0031016; P:pancreas development; IEA:Compara.
 GO:0021983; P:pituitary gland development; IEP:RGD.
 GO:0043065; P:positive regulation of apoptotic process; IEA:Compara.
 GO:0008284; P:positive regulation of cell proliferation; IEA:Compara.
 GO:0010628; P:positive regulation of gene expression; IEA:Compara.
 GO:0009954; P:proximal/distal pattern formation; IEA:Compara.
 GO:0001936; P:regulation of endothelial cell proliferation; IEA:Compara.
 GO:0034097; P:response to cytokine stimulus; IEA:Compara.
 GO:0032355; P:response to estradiol stimulus; IEP:RGD.
 GO:0033189; P:response to vitamin A; IEP:RGD.
 GO:0042574; P:retinal metabolic process; IEA:Compara.
 GO:0002138; P:retinoic acid biosynthetic process; IMP:RGD.
 GO:0048384; P:retinoic acid receptor signaling pathway; IEA:Compara.
 GO:0042572; P:retinol metabolic process; IEA:UniProtKB-UniPathway.
 GO:0035799; P:ureter maturation; IEA:Compara. 
Interpro
 IPR016161; Ald_DH/histidinol_DH.
 IPR016163; Ald_DH_C.
 IPR016160; Ald_DH_CS.
 IPR016162; Ald_DH_N.
 IPR015590; Aldehyde_DH_dom. 
Pfam
 PF00171; Aldedh 
SMART
  
PROSITE
 PS00070; ALDEHYDE_DEHYDR_CYS
 PS00687; ALDEHYDE_DEHYDR_GLU 
PRINTS