CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029048
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RAB3GAP1 protein 
Protein Synonyms/Alias
 Rab3 GTPase-activating protein catalytic subunit 
Gene Name
 RAB3GAP1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
153FEMVHLRKVPNQYTHubiquitination[1, 2]
171LLDIFKSKIGCPLTPubiquitination[1, 2]
272HWSVRVRKAENPQCLubiquitination[1]
294FFKICRRKESTDEILubiquitination[1, 2, 3]
311SAFEEEGKETADITHubiquitination[1, 2]
322DITHALSKLTEPASVubiquitination[1]
333PASVPIHKLSVSNMVubiquitination[1]
345NMVHTAKKKIRKHRGubiquitination[1]
728LHYLAIQKPADLARHubiquitination[1]
813KAKFGTEKCEQEEEKubiquitination[1, 2]
852HAGRIIHKLFVNAQRubiquitination[1, 2, 4]
871TPPEEELKRMGSPEEubiquitination[1, 2]
909PRPAPYSKALPQRMYubiquitination[1, 4]
921RMYSVLTKEDFRLAVubiquitination[1, 2]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 935 AA 
Protein Sequence
MFSLISGIFT SGTWEEKSDE ISFADFKFSV THHYLVQEST DKEGKDELLE DVVPQSMQDL 60
LGMNNDFPPR AHCLVRWYGL REFVVIAPAA HSDAVLSESK CNLLLSSVSI ALGNTGCQVP 120
LFVQIHHKWR RMYVGECQGP GVRTDFEMVH LRKVPNQYTH LSGLLDIFKS KIGCPLTPLP 180
PVSIAIRFTY VLQDWQQYFW PQQPPDIDAL VGGEVGGLEF GKLPFGACED PISELHLATT 240
WPHLTEGIIV DNDVYSDLDP IQAPHWSVRV RKAENPQCLL GDFVTEFFKI CRRKESTDEI 300
LGRSAFEEEG KETADITHAL SKLTEPASVP IHKLSVSNMV HTAKKKIRKH RGVEESPLNN 360
DVLNTILLFL FPDAVSEKPL DGTTSTDNNN PPSESEDYNL YNQFKSAPSD SLTYKLALCL 420
CMINFYHGGL KGVAHLWQEF VLEMRFRWEN NFLIPGLASG PPDLRCCLLH QKLQMLNCCI 480
ERKKARDEGK KTSASDVTNI YPGDAGKAGD QLVPDNLKET DKEKGEVGKS WDSWSDSEEE 540
FFECLSDTEE LKGNGQESGK KGGPKEMANL RPEGRLYQHG KLTLLHNGEP LYIPVTQEPA 600
PMTEDLLEEQ SEVLAKLGTS AEGAHLRARM QSACLLSDME SFKAANPGCS LEDFVRWYSP 660
RDYIEEEVID EKGNVVLKGE LSARMKIPSN MWVEAWETAK PIPARRQRRL FDDTREAEKV 720
LHYLAIQKPA DLARHLLPCV IHAAVLKVKE EESLENISSV KKIIKQIISH SSKVLHFPNP 780
EDKKLEEIIH QITNVEALIA RARSLKAKFG TEKCEQEEEK EDLERFVSCL LEQPEVLVTG 840
AGRGHAGRII HKLFVNAQRA AAMTPPEEEL KRMGSPEERR QNSVSDFPPP AGREFILRTT 900
VPRPAPYSKA LPQRMYSVLT KEDFRLAVKI IDGDV 935 
Gene Ontology
 GO:0005813; C:centrosome; IDA:HPA.
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0005097; F:Rab GTPase activator activity; IEA:InterPro.
 GO:0032851; P:positive regulation of Rab GTPase activity; IEA:GOC. 
Interpro
 IPR026147; Rab3-GAP_cat_su. 
Pfam
 PF13890; Rab3-GTPase_cat 
SMART
  
PROSITE
  
PRINTS