CPLM-017299

CPLM 1.0 - Compendium of Protein Lysine Modification

Tag

Content

CPLM ID

CPLM-017299

UniProt Accession

RL51_ARATH; Q8LBI1; Q940R7

Genbank Protein ID

AY186611; AB025639; CP002686; AY054161; AY065103; AY081701; AY136319; BT000411; BT002427; BT008705; AY087197

Genbank Nucleotide ID

AAO73340.1; AEE77019.1; AAL06822.1; AAL38279.1; AAM10263.1; AAM96985.1; AAN15730.1; AAO00787.1; AAP42718.1; AAM64753.1

Protein Name

60S ribosomal protein L5-1

Protein Synonyms/Alias

Gene Name

ATL5

Gene Synonyms/Alias

RPL5A; At3g25520; MWL2.17

Created Date

July 27, 2013

Organism

Arabidopsis thaliana (Mouse-ear cress)

NCBI Taxa ID

3702

Lysine Modification

Position	Peptide	Type	References
14	TKSNAYFKRYQVKFR	acetylation	[1]

Reference

[1] Proteins of diverse function and subcellular location are lysine acetylated in Arabidopsis.
Finkemeier I, Laxa M, Miguet L, Howden AJ, Sweetlove LJ.
Plant Physiol. 2011 Apr;155(4):1779-90. [PMID: 21311031]

Functional Description

Binds to 5S ribosomal RNA.

Sequence Annotation

Keyword

Alternative splicing; Complete proteome; Cytoplasm; Nucleus; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding; rRNA-binding.

Sequence Source

UniProt (SWISSPROT/TrEMBL); GenBank; EMBL

Protein Length

301 AA

Protein Sequence

MVFVKSTKSN AYFKRYQVKF RRRRDGKTDY RARIRLINQD KNKYNTPKYR FVVRFTNKDI 60
VAQIVSASIA GDIVKASAYA HELPQYGLTV GLTNYAAAYC TGLLLARRVL KMLEMDDEYE 120
GNVEATGEDF SVEPTDSRRP FRALLDVGLI RTTTGNRVFG ALKGALDGGL DIPHSDKRFA 180
GFHKENKQLD AEIHRNYIYG GHVSNYMKLL GEDEPEKLQT HFSAYIKKGV EAESIEELYK 240
KVHAAIRADP NPKKTVKPAP KQHKRYNLKK LTYEERKNKL IERVKALNGA GGDDDDEDDE 300
E 301

Gene Ontology

GO:0009507; C:chloroplast; IDA:TAIR.
GO:0022625; C:cytosolic large ribosomal subunit; IDA:TAIR.
GO:0005730; C:nucleolus; IDA:TAIR.
GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005773; C:vacuole; IDA:TAIR.
GO:0008097; F:5S rRNA binding; IDA:TAIR.
GO:0003735; F:structural constituent of ribosome; IEA:InterPro.
GO:0009955; P:adaxial/abaxial pattern specification; IGI:TAIR.
GO:0008283; P:cell proliferation; IMP:TAIR.
GO:0009965; P:leaf morphogenesis; IMP:TAIR.
GO:0006913; P:nucleocytoplasmic transport; TAS:TAIR.
GO:0010015; P:root morphogenesis; IMP:TAIR.
GO:0006412; P:translation; IEA:InterPro.

Interpro

IPR005485; Rbsml_L5_euk/L18_arc.
IPR025607; Rbsml_L5e/L18P_C.
IPR005484; Ribosomal_L18/L5.

Pfam

PF14204; Ribosomal_L18_c
PF00861; Ribosomal_L18p

SMART

PROSITE

PRINTS

PR00058; RIBOSOMALL5.