CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-013893
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nucleoside diphosphate kinase 
Protein Synonyms/Alias
 NDK; NDP kinase; Nucleoside-2-P kinase 
Gene Name
 ndk 
Gene Synonyms/Alias
 TTHA0188 
Created Date
 July 27, 2013 
Organism
 Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) 
NCBI Taxa ID
 300852 
Lysine Modification
Position
Peptide
Type
References
55HYAEHREKPFFPGLVacetylation[1]
Reference
 [1] Acetylome with structural mapping reveals the significance of lysine acetylation in Thermus thermophilus.
 Okanishi H, Kim K, Masui R, Kuramitsu S.
 J Proteome Res. 2013 Aug 1;. [PMID: 23901841
Functional Description
 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. 
Sequence Annotation
 ACT_SITE 115 115 Pros-phosphohistidine intermediate (By
 BINDING 9 9 ATP.
 BINDING 57 57 ATP.
 BINDING 85 85 ATP.
 BINDING 91 91 ATP.
 BINDING 102 102 ATP.
 BINDING 112 112 ATP.  
Keyword
 3D-structure; ATP-binding; Complete proteome; Cytoplasm; Kinase; Magnesium; Metal-binding; Nucleotide metabolism; Nucleotide-binding; Phosphoprotein; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 137 AA 
Protein Sequence
MERTFVMIKP DGVRRGLVGE ILARFERKGF RIAALKLMQI SQELAERHYA EHREKPFFPG 60
LVRFITSGPV VAMVLEGPGV VAEVRKMMGA THPKDALPGT IRGDFATTID ENVIHGSATL 120
EDAQREIALF FRPEELL 137 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005524; F:ATP binding; IEA:HAMAP.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0004550; F:nucleoside diphosphate kinase activity; IEA:HAMAP.
 GO:0006241; P:CTP biosynthetic process; IEA:HAMAP.
 GO:0006183; P:GTP biosynthetic process; IEA:HAMAP.
 GO:0006228; P:UTP biosynthetic process; IEA:HAMAP. 
Interpro
 IPR001564; Nucleoside_diP_kinase. 
Pfam
 PF00334; NDK 
SMART
 SM00562; NDK 
PROSITE
 PS00469; NDP_KINASES 
PRINTS
 PR01243; NUCDPKINASE.