CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-012052
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 N-myc-interactor 
Protein Synonyms/Alias
 Nmi; N-myc and STAT interactor 
Gene Name
 NMI 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
36LIDEITKKNIQLKKEubiquitination[1]
61ATKEFQIKEDIPETKubiquitination[1, 2]
68KEDIPETKMKFLSVEubiquitination[2]
70DIPETKMKFLSVETPubiquitination[1, 2]
95CSFQVSSKVPYEIQKubiquitination[1]
102KVPYEIQKGQALITFubiquitination[1]
111QALITFEKEEVAQNVubiquitination[1]
123QNVVSMSKHHVQIKDubiquitination[1]
129SKHHVQIKDVNLEVTubiquitination[1, 2]
138VNLEVTAKPVPLNSGubiquitination[1, 2]
158YVEVSKMKINVTEIPubiquitination[1]
176REDQMRDKLELSFSKubiquitination[1, 2]
183KLELSFSKSRNGGGEubiquitination[1, 3]
219VADKILKKKEYPLYIubiquitination[1, 2, 3]
220ADKILKKKEYPLYINubiquitination[1]
244PYTEIHLKKYQIFSGubiquitination[3, 4, 5, 6]
245YTEIHLKKYQIFSGTubiquitination[1, 2, 4, 6]
254QIFSGTSKRTVLLTGubiquitination[1]
284NIHFQRAKNGGGEVDubiquitination[1, 2, 3]
294GGEVDVVKCSLGQPHubiquitination[1, 2, 3, 5]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302]
 [3] Methods for quantification of in vivo changes in protein ubiquitination following proteasome and deubiquitinase inhibition.
 Udeshi ND, Mani DR, Eisenhaure T, Mertins P, Jaffe JD, Clauser KR, Hacohen N, Carr SA.
 Mol Cell Proteomics. 2012 May;11(5):148-59. [PMID: 22505724]
 [4] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [5] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094]
 [6] hCKSAAP_UbSite: improved prediction of human ubiquitination sites by exploiting amino acid pattern and properties.
 Chen Z, Zhou Y, Song J, Zhang Z.
 Biochim Biophys Acta. 2013 Aug;1834(8):1461-7. [PMID: 23603789
Functional Description
 May be involved in augmenting coactivator protein recruitment to a group of sequence-specific transcription factors. Augments cytokine-mediated STAT transcription. Enhances CBP/p300 coactivator protein recruitment to STAT1 and STAT5. 
Sequence Annotation
  
Keyword
 Complete proteome; Cytoplasm; Polymorphism; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 307 AA 
Protein Sequence
MEADKDDTQQ ILKEHSPDEF IKDEQNKGLI DEITKKNIQL KKEIQKLETE LQEATKEFQI 60
KEDIPETKMK FLSVETPEND SQLSNISCSF QVSSKVPYEI QKGQALITFE KEEVAQNVVS 120
MSKHHVQIKD VNLEVTAKPV PLNSGVRFQV YVEVSKMKIN VTEIPDTLRE DQMRDKLELS 180
FSKSRNGGGE VDRVDYDRQS GSAVITFVEI GVADKILKKK EYPLYINQTC HRVTVSPYTE 240
IHLKKYQIFS GTSKRTVLLT GMEGIQMDEE IVEDLINIHF QRAKNGGGEV DVVKCSLGQP 300
HIAYFEE 307 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:UniProtKB.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0003712; F:transcription cofactor activity; TAS:ProtInc.
 GO:0006954; P:inflammatory response; TAS:ProtInc.
 GO:0007259; P:JAK-STAT cascade; TAS:UniProtKB.
 GO:0006366; P:transcription from RNA polymerase II promoter; TAS:ProtInc. 
Interpro
 IPR009938; Interferon_induced_35kDa_N.
 IPR009909; Nmi/IFP35. 
Pfam
 PF07334; IFP_35_N
 PF07292; NID 
SMART
  
PROSITE
  
PRINTS