CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-037199
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 DNA-directed RNA polymerase II subunit RPB11-b2 
Protein Synonyms/Alias
  
Gene Name
 POLR2J3 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
87KSPCATGKDINKHQEubiquitination[1]
126LNCAALAKRAAPEHIubiquitination[1]
238DTHCQPTKIGCNHPLubiquitination[1]
254GPGPYRVKFLVMNDEubiquitination[1]
268EGPVAETKWSSDTR*ubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 274 AA 
Protein Sequence
MNAPPAFESF LLFEGEKITI NKDTKVPNAC LFTINKEDHT LGNIIKSRAC FPFAFCRDCQ 60
FPEASPATLP VQPAELLAWK SPCATGKDIN KHQEVSKSTR SHRHHVDIHL PVFPGKILLN 120
CAALAKRAAP EHISYVPQLS NDTLAGRLTL STFTLEQPLG QFSSHNISDL DTIWLVVALS 180
NATQSFTAPR TNQDIPAPAN FSQRGYYLTL RANRVLYQTR GQLHVLRVGN DTHCQPTKIG 240
CNHPLPGPGP YRVKFLVMND EGPVAETKWS SDTR 274 
Gene Ontology
 GO:0003677; F:DNA binding; IEA:InterPro.
 GO:0003899; F:DNA-directed RNA polymerase activity; IEA:InterPro.
 GO:0006351; P:transcription, DNA-dependent; IEA:InterPro. 
Interpro
 IPR009025; DNA-dir_RNA_pol_RBP11-like.
 IPR024831; Uroplakin-3.
 IPR024827; Uroplakin-3b-like. 
Pfam
  
SMART
  
PROSITE
  
PRINTS