CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002661
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 D-alanyl-D-alanine carboxypeptidase DacC 
Protein Synonyms/Alias
 DD-carboxypeptidase; DD-peptidase; Penicillin-binding protein 6; PBP-6 
Gene Name
 dacC 
Gene Synonyms/Alias
 b0839; JW0823 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
95TDMVTVGKDAWATGNacetylation[1]
214EKEFTFNKIRQPNRNacetylation[1]
292FETVTPIKPDATFVTacetylation[1]
331RGQLKNLKASYTLTEacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors. 
Sequence Annotation
 ACT_SITE 66 66 Acyl-ester intermediate (By similarity).
 ACT_SITE 69 69 Proton acceptor (By similarity).
 ACT_SITE 132 132 By similarity.
 BINDING 235 235 Substrate (By similarity).  
Keyword
 3D-structure; Carboxypeptidase; Cell inner membrane; Cell membrane; Cell shape; Cell wall biogenesis/degradation; Complete proteome; Direct protein sequencing; Hydrolase; Membrane; Peptidoglycan synthesis; Protease; Reference proteome; Signal. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 400 AA 
Protein Sequence
MTQYSSLLRG LAAGSAFLFL FAPTAFAAEQ TVEAPSVDAR AWILMDYASG KVLAEGNADE 60
KLDPASLTKI MTSYVVGQAL KADKIKLTDM VTVGKDAWAT GNPALRGSSV MFLKPGDQVS 120
VADLNKGVII QSGNDACIAL ADYVAGSQES FIGLMNGYAK KLGLTNTTFQ TVHGLDAPGQ 180
FSTARDMALL GKALIHDVPE EYAIHKEKEF TFNKIRQPNR NRLLWSSNLN VDGMKTGTTA 240
GAGYNLVASA TQGDMRLISV VLGAKTDRIR FNESEKLLTW GFRFFETVTP IKPDATFVTQ 300
RVWFGDKSEV NLGAGEAGSV TIPRGQLKNL KASYTLTEPQ LTAPLKKGQV VGTIDFQLNG 360
KSIEQRPLIV MENVEEGGFF GRVWDFVMMK FHQWFGSWFS 400 
Gene Ontology
 GO:0005887; C:integral to plasma membrane; IDA:EcoliWiki.
 GO:0004180; F:carboxypeptidase activity; IDA:EcoCyc.
 GO:0008658; F:penicillin binding; IDA:EcoCyc.
 GO:0009002; F:serine-type D-Ala-D-Ala carboxypeptidase activity; IEA:EC.
 GO:0009252; P:peptidoglycan biosynthetic process; IDA:EcoCyc.
 GO:0006508; P:proteolysis; IEA:UniProtKB-KW.
 GO:0008360; P:regulation of cell shape; IGI:EcoCyc.
 GO:0042493; P:response to drug; IMP:EcoCyc. 
Interpro
 IPR012338; Beta-lactam/transpept-like.
 IPR015956; Peniciliin-bd_prot-assoc.
 IPR018044; Peptidase_S11.
 IPR012907; Peptidase_S11_C.
 IPR001967; Peptidase_S11_N. 
Pfam
 PF07943; PBP5_C
 PF00768; Peptidase_S11 
SMART
 SM00936; PBP5_C 
PROSITE
  
PRINTS
 PR00725; DADACBPTASE1.