CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007883
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Transposon Ty4-J Gag polyprotein 
Protein Synonyms/Alias
 TY4A; Transposon Ty4 protein A 
Gene Name
 TY4A-J 
Gene Synonyms/Alias
 YJLWTy4-1 GAG; YJL114W; J0775 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
400KVLEQDTKKVEQSVQacetylation[1]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919
Functional Description
 Capsid protein (CA) is the structural component of the virus-like particle (VLP), forming the shell that encapsulates the retrotransposons dimeric RNA genome (By similarity). 
Sequence Annotation
  
Keyword
 Coiled coil; Complete proteome; Reference proteome; Ribosomal frameshifting; Transposable element. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 414 AA 
Protein Sequence
MATPVRGETR NVIDDNISAR IQSKVKTNDT VRQTPSSLRK VSIKDEQVRQ YQRNLNRFKT 60
ILNGLKAEEE KLSEADDIQM LAEKLLKLGE TIDKVENRIV DLVEKIQLLE TNENNNILHE 120
HIDATGTYYL FDTLTSTNKR FYPKDCVFDY RTNNVENIPI LLNNFKKFIK KYQFDDVFEN 180
DIIEIDPREN EILCKIIKEG LGESLDIMNT NTTDIFRIID GLKKQNIEVC MVEMSELEPG 240
EKVLVDTTCR NSALLMNKLQ KLVLMEKWIF SKCCQDCPNL KDYLQEAIMG TLHESLRNSV 300
KQRLYNIPHD VGIDHEEFLI NTVIETVIDL SPIADDQIEN SCMYCKSVFH CSINCKKKPN 360
RELRPDSTNF SKTYYLQGAQ RQQPLKSSAK RTKVLEQDTK KVEQSVQQQK TGNY 414 
Gene Ontology
 GO:0000943; C:retrotransposon nucleocapsid; ISS:SGD.
 GO:0003723; F:RNA binding; ISS:SGD.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0032197; P:transposition, RNA-mediated; ISS:SGD. 
Interpro
 IPR001878; Znf_CCHC. 
Pfam
  
SMART
 SM00343; ZnF_C2HC 
PROSITE
  
PRINTS