CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-041809
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RIKEN cDNA 2810439F02 
Protein Synonyms/Alias
 Tetratricopeptide repeat protein 39C 
Gene Name
 Ttc39c 
Gene Synonyms/Alias
 2810439F02Rik; mCG_20198 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
50RESDQLFKQYRNHSPubiquitination[1]
88QLACDDLKTTEKLCEubiquitination[1]
92DDLKTTEKLCESEEAubiquitination[1]
106AGVIETIKNKIKKNVubiquitination[1]
164WILRKAWKIYSKCYVubiquitination[1]
261LTYASESKDMKAPLAubiquitination[1]
298KGGLDEAKAILLRKEubiquitination[1]
413LVLKEVQKLFKRKNNubiquitination[1]
418VQKLFKRKNNQIEQFubiquitination[1]
428QIEQFSVKKAERFRKubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 580 AA 
Protein Sequence
MAGSEEQWPR RREDGDPDAA AAPLQDAELA LAGINMLLNN GFRESDQLFK QYRNHSPLMS 60
FGASFVSFLN AMMTFEEEKM QLACDDLKTT EKLCESEEAG VIETIKNKIK KNVDARKSTP 120
SMVDRLQRQI IIADCQVYLA VLSFVKQELS AYIKGGWILR KAWKIYSKCY VDINALQELY 180
QKKLTEEPLA SDAANDNHVV AEGVTEESLS RLKGAVSFGY GLFHLCISMV PPNLLKIINL 240
LGFPGDRLQG LSSLTYASES KDMKAPLATL ALLWYHTVVR PFFALDGSDN KGGLDEAKAI 300
LLRKESAYPN SSLFMFFKGR IQRLECQINS ALTSFHTALE LAVDQREIQH VCLYEIGWCS 360
MIELNFKDAF DSFERLKNES RWSQCYYAYL TAVCQGATGD VDGAQLVLKE VQKLFKRKNN 420
QIEQFSVKKA ERFRKQTPTR ALCVLASIEV LYLWKALPNC SFPNLQRMSQ ACHEVDDSSV 480
VGLKHLLLGA IHKCLGNSQD ALQFFQRAAR DELCRQSNSY VPPYACYELG CLLLDSAETV 540
GRGRTLLLQA KEDFSGYDFE NRLHVRIHAA LASLRELVPQ 580 
Gene Ontology
  
Interpro
 IPR019412; OMP_IML2_mit/TPR_39.
 IPR011990; TPR-like_helical. 
Pfam
 PF10300; DUF3808 
SMART
  
PROSITE
  
PRINTS