CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003517
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Nitrate/nitrite response regulator protein NarL 
Protein Synonyms/Alias
  
Gene Name
 narL 
Gene Synonyms/Alias
 frdR; b1221; JW1212 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
100EDVVTALKRGADGYLacetylation[1]
109GADGYLLKDMEPEDLacetylation[1]
165PRERDILKLIAQGLPacetylation[1]
174IAQGLPNKMIARRLDacetylation[1]
188DITESTVKVHVKHMLacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 This protein activates the expression of the nitrate reductase (narGHJI) and formate dehydrogenase-N (fdnGHI) operons and represses the transcription of the fumarate reductase (frdABCD) operon in response to a nitrate/nitrite induction signal transmitted by either the NarX or NarQ proteins. 
Sequence Annotation
 DOMAIN 8 124 Response regulatory.
 DOMAIN 149 214 HTH luxR-type.
 DNA_BIND 173 192 H-T-H motif (By similarity).
 MOD_RES 59 59 4-aspartylphosphate (By similarity).  
Keyword
 3D-structure; Activator; ATP-binding; Complete proteome; DNA-binding; Nitrate assimilation; Nucleotide-binding; Phosphoprotein; Reference proteome; Repressor; Transcription; Transcription regulation; Two-component regulatory system. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 216 AA 
Protein Sequence
MSNQEPATIL LIDDHPMLRT GVKQLISMAP DITVVGEASN GEQGIELAES LDPDLILLDL 60
NMPGMNGLET LDKLREKSLS GRIVVFSVSN HEEDVVTALK RGADGYLLKD MEPEDLLKAL 120
HQAAAGEMVL SEALTPVLAA SLRANRATTE RDVNQLTPRE RDILKLIAQG LPNKMIARRL 180
DITESTVKVH VKHMLKKMKL KSRVEAAVWV HQERIF 216 
Gene Ontology
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
 GO:0003677; F:DNA binding; IMP:EcoCyc.
 GO:0000156; F:phosphorelay response regulator activity; IEA:InterPro.
 GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
 GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:InterPro.
 GO:0035556; P:intracellular signal transduction; IEA:GOC.
 GO:0042128; P:nitrate assimilation; IEA:UniProtKB-KW.
 GO:0006355; P:regulation of transcription, DNA-dependent; IMP:EcoCyc.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR011006; CheY-like_superfamily.
 IPR016032; Sig_transdc_resp-reg_C-effctor.
 IPR001789; Sig_transdc_resp-reg_receiver.
 IPR000792; Tscrpt_reg_LuxR_C.
 IPR011991; WHTH_DNA-bd_dom. 
Pfam
 PF00196; GerE
 PF00072; Response_reg 
SMART
 SM00421; HTH_LUXR
 SM00448; REC 
PROSITE
 PS00622; HTH_LUXR_1
 PS50043; HTH_LUXR_2
 PS50110; RESPONSE_REGULATORY 
PRINTS
 PR00038; HTHLUXR.