CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003913
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Coproporphyrinogen-III oxidase 
Protein Synonyms/Alias
 COX; Coprogen oxidase; Coproporphyrinogenase 
Gene Name
 HEM13 
Gene Synonyms/Alias
 YDR044W; YD5112.02 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
100LRLPEDPKTGLPVTDubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Key enzyme in heme biosynthesis. Catalyzes the oxidative decarboxylation of propionic acid side chains of rings A and B of coproporphyrinogen III (By similarity). 
Sequence Annotation
 REGION 57 66 Important for dimerization (By
 REGION 133 135 Substrate binding (By similarity).
 REGION 266 302 Important for dimerization (By
 REGION 285 290 Substrate binding (By similarity).
 ACT_SITE 131 131 Proton donor (By similarity).
 BINDING 117 117 Substrate (By similarity).
 DISULFID 193 193 Interchain.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; Direct protein sequencing; Disulfide bond; Heme biosynthesis; Oxidoreductase; Porphyrin biosynthesis; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 328 AA 
Protein Sequence
MPAPQDPRNL PIRQQMEALI RRKQAEITQG LESIDTVKFH ADTWTRGNDG GGGTSMVIQD 60
GTTFEKGGVN VSVVYGQLSP AAVSAMKADH KNLRLPEDPK TGLPVTDGVK FFACGLSMVI 120
HPVNPHAPTT HLNYRYFETW NQDGTPQTWW FGGGADLTPS YLYEEDGQLF HQLHKDALDK 180
HDTALYPRFK KWCDEYFYIT HRKETRGIGG IFFDDYDERD PQEILKMVED CFDAFLPSYL 240
TIVKRRKDMP YTKEEQQWQA IRRGRYVEFN LIYDRGTQFG LRTPGSRVES ILMSLPEHAS 300
WLYNHHPAPG SREAKLLEVT TKPREWVK 328 
Gene Ontology
 GO:0005829; C:cytosol; IDA:SGD.
 GO:0004109; F:coproporphyrinogen oxidase activity; IDA:SGD.
 GO:0042803; F:protein homodimerization activity; ISS:UniProtKB.
 GO:0006783; P:heme biosynthetic process; IMP:SGD.
 GO:0006782; P:protoporphyrinogen IX biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR001260; Coprogen_oxidase_aer.
 IPR018375; Coprogen_oxidase_CS. 
Pfam
 PF01218; Coprogen_oxidas 
SMART
  
PROSITE
 PS01021; COPROGEN_OXIDASE 
PRINTS
 PR00073; COPRGNOXDASE.