CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035715
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Plexin D1 (Predicted) 
Protein Synonyms/Alias
 Protein Plxnd1 
Gene Name
 Plxnd1 
Gene Synonyms/Alias
 Plxnd1_predicted; rCG_30309 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
1448LAMSLTDKKDNTLGRubiquitination[1]
1457DNTLGRVKDLDTEKYacetylation[2]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Disulfide bond; Membrane; Reference proteome; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 1716 AA 
Protein Sequence
MLNVAANHPN ASTVGLVLPP ASGTGGSRLL VGATYTGYGS AFFPRNRSLE DHRFENTPEI 60
SIRSLDARGD LAKLFTFDLN PSDDNILKIK QGAKEQHKLG FVRAFLHPAV PPHSAHPYAY 120
LALNSEARAG DKDSQARSLL ARICLPRGAG GDAKKLTESY IQLGLQCAGG AGRGDLYSRL 180
VSVFPAREQF FAVFERPQGT PGARNAPAAL CAFRFADVQA AIRAARTACF LQPEQLDCGA 240
AHLQHPLTIL QPLRASPVFR APGLTAVAVA NANNYTAVFL GTATGRLLKI SLNESMQVVS 300
RRVLTVAYGE PVHHVMQFDP MDPGYLYLMT SHQMARVKVA ACEVHSTCGD CVGAADAYCG 360
WCTLETRCTF KQDCANSSLP HFWTSASEGP SRCPAMTVLP SEIDVHRDYT GMILQISGSL 420
PSLSGMEMAC DYGNGVRTVA RVPGPAYGHQ IAYCNLLPRA QFPPFPAGQD HVTVEMSVRV 480
KGHNIVSANF TIYDCSRIGQ VYPHTACTSC LSTQWPCSWC IQLHSCVSNQ SRCQDSPNPT 540
SPQDCPQIVP SPLAPVPTGG SQDILVPLTK AAFFHGTSLQ CSFGLEENFE AVWANDSLVR 600
CNQVVLHTTQ KSQVFPLSLK LKGPPDRFLD SPNPMTVVVY NCAMGSPDCS QCLGREDLGH 660
LCVWNDGCRL RGPLQPLSGT CPAPEIRAIE PLSGPLNGGT LLTIRGKNLG RRLSDVAHGV 720
WIGNVACEPL ADRYTVSEEI VCATGPAPGA FSDVVTVNVS KEGRSREQFS YVLPRVHSLE 780
PSMGPKAGGT RITIHGSDLN VGSMLQVLVN DTDPCTDLTR TATSITCTVP RGTLPSPVPV 840
CVRFESRGCV HGNLTFWYMQ NPVITAISPG RSPVSGGRTI TVAGERFHMV QNVSMAVHHI 900
GREPTFCKVL NSTLIICPSP GALSNASAPV DFFINGRAYA DEAAEELLDP AEAQRGSRFR 960
LDYLPNPQFS TAKREKWIKH HPGEPLTLVI HKEQDSLGLE SHEYHIKIGQ VSCDIQIISD 1020
RVIHCSVNES LGTAEGQLPI TIQVGNFNQT IATLQLGGSE TAIVVSIVIC SVLLLLSVVA 1080
LFVFCTKSRR AERYWQKTLL QMEEMESQIR EEIRKGFAEL QTDMTDLTKE LNRSQGIPFL 1140
EYKHFVTRTF FPKCSSLYEE RYVLPSKTLN SQGGSPPQET HPLLGEWNIP EHCRPSMEEG 1200
ISLFSSLLNN KHFLIVFVHA LEQQKDFAVR DRCSLASLLT IALHGKLEYY TSIMKELLVD 1260
LIDASAAKNP KLMLRRTESV VEKMLTNWMS ICMYGCLRET VGEPFFLLLC AIKQQINKGS 1320
IDAITGKARY TLNEEWLLRE NIEAKPRNLN VSFQGCGMDS LSVRAMDTDT LTQVKEKILE 1380
AFCKNVPYSQ WPRAEDVDLE WFASSTQSYV LRDLDDTSVV EDGRKKLNTL AHYKIPEGAS 1440
LAMSLTDKKD NTLGRVKDLD TEKYFHLVLP TDELVEPKKS HRQSHRKKVL PEIYLTRLLS 1500
TKGTLQKFLD DLFKAILSIR EDKPPLAVKY FFDFLEEQAE KRGISDPDTL HIWKTNSLPL 1560
RFWVNILKNP QFVFDIEKTD HIDACLSVIA QAFIDACSIS DLQLGKDSPT NKLLYAKEIP 1620
EYRKIVQRYY KQIQDMTPLS EQEMNAHLAE ESRKYQNEFN TNVAMAEIYK YAKRYRPQIM 1680
AALEANPTAR RTQLQYKFEQ VVALMENNIY ECYSEA 1716 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005622; C:intracellular; IEA:InterPro.
 GO:0004872; F:receptor activity; IEA:InterPro.
 GO:0007275; P:multicellular organismal development; IEA:InterPro.
 GO:0007165; P:signal transduction; IEA:InterPro. 
Interpro
 IPR013783; Ig-like_fold.
 IPR014756; Ig_E-set.
 IPR002909; IPT_TIG_rcpt.
 IPR003659; Plexin-like.
 IPR016201; Plexin-like_fold.
 IPR013548; Plexin_cytoplasmic_RasGAP_dom.
 IPR002165; Plexin_repeat.
 IPR008936; Rho_GTPase_activation_prot.
 IPR001627; Semaphorin/CD100_Ag.
 IPR015943; WD40/YVTN_repeat-like_dom. 
Pfam
 PF08337; Plexin_cytopl
 PF01437; PSI
 PF01833; TIG 
SMART
 SM00429; IPT
 SM00423; PSI
 SM00630; Sema 
PROSITE
 PS51004; SEMA 
PRINTS