CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-003911
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Respiratory nitrate reductase 1 beta chain 
Protein Synonyms/Alias
 Nitrate reductase A subunit beta; Quinol-nitrate oxidoreductase subunit beta 
Gene Name
 narH 
Gene Synonyms/Alias
 b1225; JW1216 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
61TDWENQEKYKGGWIRacetylation[1]
154DLGGEFDKLAKDKNFacetylation[1]
290AASTENEKDLYQRQLacetylation[1]
307FLDPNDPKVIEQAIKacetylation[1]
314KVIEQAIKDGIPLSVacetylation[1]
338YKMAMEWKLALPLHPacetylation[1]
400LLTAGDTKPVLRALKacetylation[1, 2]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 The nitrate reductase enzyme complex allows E.coli to use nitrate as an electron acceptor during anaerobic growth. The beta chain is an electron transfer unit containing four cysteine clusters involved in the formation of iron-sulfur centers. Electrons are transferred from the gamma chain to the molybdenum cofactor of the alpha subunit. 
Sequence Annotation
 DOMAIN 7 35 4Fe-4S ferredoxin-type 1.
 DOMAIN 175 206 4Fe-4S ferredoxin-type 2.
 DOMAIN 208 237 4Fe-4S ferredoxin-type 3.
 METAL 16 16 Iron-sulfur 1 (4Fe-4S).
 METAL 19 19 Iron-sulfur 1 (4Fe-4S).
 METAL 22 22 Iron-sulfur 1 (4Fe-4S).
 METAL 26 26 Iron-sulfur 2 (4Fe-4S).
 METAL 184 184 Iron-sulfur 3 (4Fe-4S).
 METAL 187 187 Iron-sulfur 3 (4Fe-4S).
 METAL 192 192 Iron-sulfur 3 (4Fe-4S).
 METAL 196 196 Iron-sulfur 4 (3Fe-4S).
 METAL 217 217 Iron-sulfur 4 (3Fe-4S).
 METAL 223 223 Iron-sulfur 4 (3Fe-4S).
 METAL 227 227 Iron-sulfur 3 (4Fe-4S).
 METAL 244 244 Iron-sulfur 2 (4Fe-4S).
 METAL 247 247 Iron-sulfur 2 (4Fe-4S).
 METAL 259 259 Iron-sulfur 2 (4Fe-4S).
 METAL 263 263 Iron-sulfur 1 (4Fe-4S).  
Keyword
 3D-structure; 3Fe-4S; 4Fe-4S; Cell membrane; Complete proteome; Direct protein sequencing; Electron transport; Iron; Iron-sulfur; Membrane; Metal-binding; Nitrate assimilation; Oxidoreductase; Reference proteome; Repeat; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 512 AA 
Protein Sequence
MKIRSQVGMV LNLDKCIGCH TCSVTCKNVW TSREGVEYAW FNNVETKPGQ GFPTDWENQE 60
KYKGGWIRKI NGKLQPRMGN RAMLLGKIFA NPHLPGIDDY YEPFDFDYQN LHTAPEGSKS 120
QPIARPRSLI TGERMAKIEK GPNWEDDLGG EFDKLAKDKN FDNIQKAMYS QFENTFMMYL 180
PRLCEHCLNP ACVATCPSGA IYKREEDGIV LIDQDKCRGW RMCITGCPYK KIYFNWKSGK 240
SEKCIFCYPR IEAGQPTVCS ETCVGRIRYL GVLLYDADAI ERAASTENEK DLYQRQLDVF 300
LDPNDPKVIE QAIKDGIPLS VIEAAQQSPV YKMAMEWKLA LPLHPEYRTL PMVWYVPPLS 360
PIQSAADAGE LGSNGILPDV ESLRIPVQYL ANLLTAGDTK PVLRALKRML AMRHYKRAET 420
VDGKVDTRAL EEVGLTEAQA QEMYRYLAIA NYEDRFVVPS SHRELAREAF PEKNGCGFTF 480
GDGCHGSDTK FNLFNSRRID AIDVTSKTEP HP 512 
Gene Ontology
 GO:0031224; C:intrinsic to membrane; IDA:EcoCyc.
 GO:0009325; C:nitrate reductase complex; IEA:InterPro.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0051538; F:3 iron, 4 sulfur cluster binding; IPI:EcoCyc.
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IDA:EcoCyc.
 GO:0009055; F:electron carrier activity; IPI:EcoCyc.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0008940; F:nitrate reductase activity; IEA:EC.
 GO:0009061; P:anaerobic respiration; IEP:EcoCyc.
 GO:0017004; P:cytochrome complex assembly; IDA:EcoCyc.
 GO:0022900; P:electron transport chain; IEA:UniProtKB-KW.
 GO:0042128; P:nitrate assimilation; IEA:UniProtKB-KW. 
Interpro
 IPR017896; 4Fe4S_Fe-S-bd.
 IPR006547; NO3_Rdtase_bsu. 
Pfam
 PF13247; Fer4_11 
SMART
  
PROSITE
 PS00198; 4FE4S_FER_1
 PS51379; 4FE4S_FER_2 
PRINTS