CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011427
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 40S ribosomal protein S3 
Protein Synonyms/Alias
  
Gene Name
 RpS3 
Gene Synonyms/Alias
 M(3)95A; CG6779 
Created Date
 July 27, 2013 
Organism
 Drosophila melanogaster (Fruit fly) 
NCBI Taxa ID
 7227 
Lysine Modification
Position
Peptide
Type
References
64TQQVLGEKGRRIRELacetylation[1]
92RIELYAEKVAARGLCacetylation[1]
197VMLPYDPKNKIGPKKacetylation[1]
219VVEPKEEKIYETPETacetylation[1]
Reference
 [1] Proteome-wide mapping of the Drosophila acetylome demonstrates a high degree of conservation of lysine acetylation.
 Weinert BT, Wagner SA, Horn H, Henriksen P, Liu WR, Olsen JV, Jensen LJ, Choudhary C.
 Sci Signal. 2011 Jul 26;4(183):ra48. [PMID: 21791702
Functional Description
 Has DNA repair activity directed towards the mutagenic lesions 8-oxoguanine and abasic sites in DNA. It can cleave DNA containing 8-oxoguanine residues efficiently. Also acts as an ap lyase, cleaving phosphodiester bonds via a beta,delta elimination reaction. 
Sequence Annotation
 DOMAIN 23 94 KH type-2.
 MOD_RES 223 223 Phosphothreonine.
 MOD_RES 226 226 Phosphothreonine.
 MOD_RES 241 241 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; DNA damage; DNA repair; Endonuclease; Hydrolase; Nuclease; Nucleus; Phosphoprotein; Reference proteome; Ribonucleoprotein; Ribosomal protein; RNA-binding. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 246 AA 
Protein Sequence
MNANLPISKK RKFVSDGIFK AELNEFLTRE LAEDGYSGVE VRVTPSRTEI IIMATKTQQV 60
LGEKGRRIRE LTAMVQKRFN FETGRIELYA EKVAARGLCA IAQAESLRYK LTGGLAVRRA 120
CYGVLRYIME SGAKGCEVVV SGKLRGQRAK SMKFVDGLMI HSGDPCNDYV ETATRHVLLR 180
QGVLGIKVKV MLPYDPKNKI GPKKPLPDNV SVVEPKEEKI YETPETEYKI PPPSKPLDDL 240
SEAKVL 246 
Gene Ontology
 GO:0005875; C:microtubule associated complex; IDA:FlyBase.
 GO:0016363; C:nuclear matrix; IDA:FlyBase.
 GO:0005840; C:ribosome; IDA:FlyBase.
 GO:0015935; C:small ribosomal subunit; IEA:InterPro.
 GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.
 GO:0008534; F:oxidized purine nucleobase lesion DNA N-glycosylase activity; IDA:FlyBase.
 GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
 GO:0003735; F:structural constituent of ribosome; IDA:FlyBase.
 GO:0006281; P:DNA repair; IGI:FlyBase.
 GO:0007067; P:mitosis; IMP:FlyBase.
 GO:0043524; P:negative regulation of neuron apoptotic process; IMP:FlyBase.
 GO:0090305; P:nucleic acid phosphodiester bond hydrolysis; IEA:GOC.
 GO:0006412; P:translation; IEA:InterPro. 
Interpro
 IPR004087; KH_dom.
 IPR015946; KH_dom-like_a/b.
 IPR004044; KH_dom_type_2.
 IPR009019; KH_prok-type.
 IPR001351; Ribosomal_S3_C.
 IPR018280; Ribosomal_S3_CS.
 IPR005703; Ribosomal_S3_euk/arc. 
Pfam
 PF07650; KH_2
 PF00189; Ribosomal_S3_C 
SMART
 SM00322; KH 
PROSITE
 PS50823; KH_TYPE_2
 PS00548; RIBOSOMAL_S3 
PRINTS