CPLM 1.0 - Compendium of Protein Lysine Modification
Tag
Content
CPLM ID
CPLM-024267
UniProt Accession
CSPA_MYCS2
;
A0R5E1
;
I7FU90
Genbank Protein ID
CP000480
;
CP001663
Genbank Nucleotide ID
ABK75888.1
;
AFP42433.1
Protein Name
Probable cold shock protein A
Protein Synonyms/Alias
Gene Name
cspA
Gene Synonyms/Alias
MSMEG_6159; MSMEI_6001
Created Date
July 27, 2013
Organism
Mycobacterium smegmatis (strain ATCC 700084 / mc(2)155)
NCBI Taxa ID
246196
Lysine Modification
Position
Peptide
Type
References
47
RTLEENQ
K
VEFEVGQ
pupylation
[1]
Reference
[1] Expansion of the mycobacterial "PUPylome".
Watrous J, Burns K, Liu WT, Patel A, Hook V, Bafna V, Barry CE 3rd, Bark S, Dorrestein PC.
Mol Biosyst. 2010 Feb;6(2):376-85. [
PMID: 20094657
]
Functional Description
Sequence Annotation
DOMAIN 1 66 CSD.
CROSSLNK 47 47 Isoglutamyl lysine isopeptide (Lys-Gln)
Keyword
Activator; Complete proteome; Cytoplasm; DNA-binding; Isopeptide bond; Reference proteome; Transcription; Transcription regulation; Ubl conjugation.
Sequence Source
UniProt (SWISSPROT/TrEMBL); GenBank; EMBL
Protein Length
67 AA
Protein Sequence
MPQGTVKWFN AEKGFGFIAP EDGSADVFVH YTEIQGSGFR TLEENQKVEF EVGQSPKGPQ 60
ATGVRTI 67
Gene Ontology
GO:0005737
; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003677
; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355
; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
GO:0006351
; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
Interpro
IPR019844
; Cold-shock_CS.
IPR012156
; Cold_shock_CspA.
IPR011129
; Cold_shock_prot.
IPR002059
; CSP_DNA-bd.
IPR012340
; NA-bd_OB-fold.
Pfam
PF00313
; CSD
SMART
SM00357
; CSP
PROSITE
PS00352
; COLD_SHOCK
PRINTS
PR00050
; COLDSHOCK.