CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-035660
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Protein Snw1 
Protein Synonyms/Alias
 Similar to Nuclear protein SkiP (Ski-interacting protein) (Predicted) 
Gene Name
 Snw1 
Gene Synonyms/Alias
 RGD1561926_predicted; rCG_20602 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
170MPVRAADKLAPAQYIacetylation[1]
339RERRAGIKTHVEKEDacetylation[1]
476TNRFVPDKEFSGSDGacetylation[1]
Reference
 [1] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 536 AA 
Protein Sequence
MALTSFLPAP TQLSQDQLEA EERARSQRSR QTSLVSSRRE PPPYGYRKGW IPRLLEDFGD 60
GGAFPEIHVA QYPLDMGRKK KMSNALAIQV DPEGKIKYDA IARQGQSKDK VIYSKYTDLV 120
PKEVMNADDP DLQRPDEEAI KEITEKTRVA LEKSVSQKVA AAMPVRAADK LAPAQYIRYT 180
PSQQGVAFNS GAKQRVIRMV EMQKDPMEPP RFKINKKIPR GPPSPPAPVM HSPSRKMTVK 240
EQQEWKIPPC ISNWKNAKGY TIPLDKRLAA DGRGLQTVHI NENFAKLAEA LYIADRKARE 300
AVEMRAQVER KMAQKEKEKH EEKLREMAQK ARERRAGIKT HVEKEDGEAR ERDEIRHDRR 360
KERQHDRNLS RAAPDKRSKL QRNENRDISE VIALGVPNPR TSNEVQYDQR LFNQSKGMDS 420
GFAGGEDEIY NVYDQAWRGG KDMAQSIYRP SKNLDKDMYG DDLETRIKTN RFVPDKEFSG 480
SDGRKRGREG PVQFEEDPFG LDKFLEEAKQ HGGSKRPSDS SRPKEHEHEG KKRRKE 536 
Gene Ontology
 GO:0071013; C:catalytic step 2 spliceosome; IEA:Compara.
 GO:0000785; C:chromatin; IDA:RGD.
 GO:0016363; C:nuclear matrix; IEA:Compara.
 GO:0008024; C:positive transcription elongation factor complex b; IEA:Compara.
 GO:0071146; C:SMAD3-SMAD4 protein complex; IEA:Compara.
 GO:0003713; F:transcription coactivator activity; IEA:Compara.
 GO:0003714; F:transcription corepressor activity; IEA:Compara.
 GO:0071300; P:cellular response to retinoic acid; IEA:Compara.
 GO:0042771; P:intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator; IEA:Compara.
 GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0043923; P:positive regulation by host of viral transcription; IEA:Compara.
 GO:0051571; P:positive regulation of histone H3-K4 methylation; IEA:Compara.
 GO:0048026; P:positive regulation of mRNA splicing, via spliceosome; IEA:Compara.
 GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IEA:Compara.
 GO:0030511; P:positive regulation of transforming growth factor beta receptor signaling pathway; IEA:Compara.
 GO:0070564; P:positive regulation of vitamin D receptor signaling pathway; IEA:Compara.
 GO:0048385; P:regulation of retinoic acid receptor signaling pathway; IEA:Compara.
 GO:0048384; P:retinoic acid receptor signaling pathway; IEA:Compara. 
Interpro
 IPR017862; SKI-int_prot_SKIP.
 IPR004015; SKI-int_prot_SKIP_SNW-dom. 
Pfam
 PF02731; SKIP_SNW 
SMART
  
PROSITE
  
PRINTS