CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004630
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Proliferating cell nuclear antigen 
Protein Synonyms/Alias
 PCNA; Cyclin 
Gene Name
 Pcna 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
80TSMSKILKCAGNEDIubiquitination[1, 2]
164AVVISCAKNGVKFSAubiquitination[1]
248IADMGHLKYYLAPKIubiquitination[1, 2]
254LKYYLAPKIEDEEASubiquitination[2]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] BTB-ZF factors recruit the E3 ligase cullin 3 to regulate lymphoid effector programs.
 Mathew R, Seiler MP, Scanlon ST, Mao AP, Constantinides MG, Bertozzi-Villa C, Singer JD, Bendelac A.
 Nature. 2012 Nov 22;491(7425):618-21. [PMID: 23086144
Functional Description
 Auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand. Induces a robust stimulatory effect on the 3'- 5' exonuclease and 3'-phosphodiesterase, but not apurinic- apyrimidinic (AP) endonuclease, APEX2 activities. Has to be loaded onto DNA in order to be able to stimulate APEX2. Plays a key role in DNA damage response (DDR) by being conveniently positioned at the replication fork to coordinate DNA replication with DNA repair and DNA damage tolerance pathways. Acts as a loading platform to recruit DDR proteins that allow completion of DNA replication after DNA damage and promote postreplication repair: Monoubiquitinated PCNA leads to recruitment of translesion (TLS) polymerases, while 'Lys-63'-linked polyubiquitination of PCNA is involved in error-free pathway and employs recombination mechanisms to synthesize across the lesion (By similarity). 
Sequence Annotation
 DNA_BIND 61 80 Potential.
 MOD_RES 14 14 N6-acetyllysine (By similarity).
 MOD_RES 77 77 N6-acetyllysine (By similarity).
 MOD_RES 80 80 N6-acetyllysine (By similarity).
 MOD_RES 211 211 Phosphotyrosine; by EGFR.
 MOD_RES 248 248 N6-acetyllysine (By similarity).
 CROSSLNK 164 164 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 Acetylation; Complete proteome; DNA damage; DNA repair; DNA replication; DNA-binding; Isopeptide bond; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 261 AA 
Protein Sequence
MFEARLIQGS ILKKVLEALK DLINEACWDV SSGGVNLQSM DSSHVSLVQL TLRSEGFDTY 60
RCDRNLAMGV NLTSMSKILK CAGNEDIITL RAEDNADTLA LVFEAPNQEK VSDYEMKLMD 120
LDVEQLGIPE QEYSCVIKMP SGEFARICRD LSHIGDAVVI SCAKNGVKFS ASGELGNGNI 180
KLSQTSNVDK EEEAVTIEMN EPVHLTFALR YLNFFTKATP LSPTVTLSMS ADVPLVVEYK 240
IADMGHLKYY LAPKIEDEEA S 261 
Gene Ontology
 GO:0000307; C:cyclin-dependent protein kinase holoenzyme complex; IPI:MGI.
 GO:0005652; C:nuclear lamina; IDA:MGI.
 GO:0043626; C:PCNA complex; IEA:InterPro.
 GO:0070557; C:PCNA-p21 complex; ISS:UniProtKB.
 GO:0005657; C:replication fork; IDA:MGI.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0030337; F:DNA polymerase processivity factor activity; IEA:InterPro.
 GO:0006287; P:base-excision repair, gap-filling; IDA:MGI.
 GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
 GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.
 GO:0032077; P:positive regulation of deoxyribonuclease activity; ISS:UniProtKB.
 GO:0006275; P:regulation of DNA replication; IEA:InterPro.
 GO:0019985; P:translesion synthesis; ISS:UniProtKB. 
Interpro
 IPR000730; Pr_cel_nuc_antig.
 IPR022649; Pr_cel_nuc_antig_C.
 IPR022659; Pr_cel_nuc_antig_CS.
 IPR022648; Pr_cel_nuc_antig_N. 
Pfam
 PF02747; PCNA_C
 PF00705; PCNA_N 
SMART
  
PROSITE
 PS01251; PCNA_1
 PS00293; PCNA_2 
PRINTS
 PR00339; PCNACYCLIN.