CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006766
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Outer membrane porin protein OmpD 
Protein Synonyms/Alias
  
Gene Name
 ompD 
Gene Synonyms/Alias
 nmpC; STM1572 
Created Date
 July 27, 2013 
Organism
 Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) 
NCBI Taxa ID
 99287 
Lysine Modification
Position
Peptide
Type
References
93TESQGADKDKTRLAFacetylation[1]
95SQGADKDKTRLAFAGacetylation[1]
Reference
 [1] Regulation of cellular metabolism by protein lysine acetylation.
 Zhao S, Xu W, Jiang W, Yu W, Lin Y, Zhang T, Yao J, Zhou L, Zeng Y, Li H, Li Y, Shi J, An W, Hancock SM, He F, Qin L, Chin J, Yang P, Chen X, Lei Q, Xiong Y, Guan KL.
 Science. 2010 Feb 19;327(5968):1000-4. [PMID: 20167786] 
Functional Description
 Forms pores that allow passive diffusion of small molecules across the outer membrane (By similarity). 
Sequence Annotation
  
Keyword
 Cell membrane; Cell outer membrane; Complete proteome; Ion transport; Membrane; Porin; Reference proteome; Signal; Transmembrane; Transmembrane beta strand; Transport. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 362 AA 
Protein Sequence
MKLKLVAVAV TSLLAAGVVN AAEVYNKDGN KLDLYGKVHA QHYFSDDNGS DGDKTYARLG 60
FKGETQINDQ LTGFGQWEYE FKGNRTESQG ADKDKTRLAF AGLKFADYGS FDYGRNYGVA 120
YDIGAWTDVL PEFGGDTWTQ TDVFMTGRTT GVATYRNTDF FGLVEGLNFA AQYQGKNDRD 180
GAYESNGDGF GLSATYEYEG FGVGAAYAKS DRTNNQVKAA SNLNAAGKNA EVWAAGLKYD 240
ANNIYLATTY SETLNMTTFG EDAAGDAFIA NKTQNFEAVA QYQFDFGLRP SIAYLKSKGK 300
NLGTYGDQDL VEYIDVGATY YFNKNMSTFV DYKINLLDDS DFTKAAKVST DNIVAVGLNY 360
QF 362 
Gene Ontology
 GO:0009279; C:cell outer membrane; IEA:UniProtKB-SubCell.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
 GO:0046930; C:pore complex; IEA:UniProtKB-KW.
 GO:0015288; F:porin activity; IEA:UniProtKB-KW.
 GO:0006811; P:ion transport; IEA:UniProtKB-KW. 
Interpro
 IPR017690; OM_insertion_C_omp85_target.
 IPR023614; Porin_dom.
 IPR001897; Porin_gammaproteobac.
 IPR001702; Porin_Gram-ve.
 IPR013793; Porin_Gram-ve_CS. 
Pfam
 PF00267; Porin_1 
SMART
  
PROSITE
 PS00576; GRAM_NEG_PORIN 
PRINTS
 PR00183; ECOLIPORIN.
 PR00182; ECOLNEIPORIN.