CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-004411
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Ribosyldihydronicotinamide dehydrogenase [quinone] 
Protein Synonyms/Alias
 NRH dehydrogenase [quinone] 2; NRH:quinone oxidoreductase 2; Quinone reductase 2; QR2 
Gene Name
 NQO2 
Gene Synonyms/Alias
 NMOR2 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
16VYAHQEPKSFNGSLKubiquitination[1]
23KSFNGSLKNVAVDELubiquitination[2, 3]
54LEPRATDKDITGTLSubiquitination[2]
77VETHEAYKQRSLASDubiquitination[2]
90SDITDEQKKVREADLubiquitination[2, 4]
158GTAEMYTKTGVNGDSubiquitination[2, 4]
217QRLQTIWKEEPIPCTubiquitination[3]
Reference
 [1] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [2] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [4] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
 The enzyme apparently serves as a quinone reductase in connection with conjugation reactions of hydroquinones involved in detoxification pathways as well as in biosynthetic processes such as the vitamin K-dependent gamma-carboxylation of glutamate residues in prothrombin synthesis. 
Sequence Annotation
 NP_BIND 18 21 FAD.
 NP_BIND 104 107 FAD.
 NP_BIND 148 151 FAD.
 REGION 127 129 Substrate binding.
 METAL 174 174 Zinc.
 METAL 178 178 Zinc.
 METAL 223 223 Zinc.
 BINDING 12 12 FAD.
 BINDING 156 156 FAD.
 BINDING 194 194 FAD.
 BINDING 201 201 FAD.
 MOD_RES 80 80 Phosphoserine.
 MOD_RES 197 197 Phosphoserine.  
Keyword
 3D-structure; Complete proteome; Cytoplasm; FAD; Flavoprotein; Metal-binding; Oxidoreductase; Phosphoprotein; Polymorphism; Reference proteome; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 231 AA 
Protein Sequence
MAGKKVLIVY AHQEPKSFNG SLKNVAVDEL SRQGCTVTVS DLYAMNLEPR ATDKDITGTL 60
SNPEVFNYGV ETHEAYKQRS LASDITDEQK KVREADLVIF QFPLYWFSVP AILKGWMDRV 120
LCQGFAFDIP GFYDSGLLQG KLALLSVTTG GTAEMYTKTG VNGDSRYFLW PLQHGTLHFC 180
GFKVLAPQIS FAPEIASEEE RKGMVAAWSQ RLQTIWKEEP IPCTAHWHFG Q 231 
Gene Ontology
 GO:0005737; C:cytoplasm; IDA:HPA.
 GO:0005634; C:nucleus; IDA:HPA.
 GO:0001512; F:dihydronicotinamide riboside quinone reductase activity; IEA:EC.
 GO:0009055; F:electron carrier activity; TAS:UniProtKB.
 GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
 GO:0008753; F:NADPH dehydrogenase (quinone) activity; TAS:ProtInc.
 GO:0007613; P:memory; IEA:Compara. 
Interpro
 IPR003680; Flavodoxin_fold. 
Pfam
 PF02525; Flavodoxin_2 
SMART
  
PROSITE
  
PRINTS