CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031693
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Protein disulfide-isomerase A6 
Protein Synonyms/Alias
  
Gene Name
 PDIA6 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
125TALKDVVKVGAVDADubiquitination[1]
156IKIFGSNKNRPEDYQubiquitination[2]
264EQTKGKVKLAAVDATubiquitination[3]
289IRGFPTIKIFQKGESubiquitination[2, 3]
293PTIKIFQKGESPVDYubiquitination[1, 2, 3]
416AINARKMKFALLKGSubiquitination[2]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles.
 Wagner SA, Beli P, Weinert BT, Nielsen ML, Cox J, Mann M, Choudhary C.
 Mol Cell Proteomics. 2011 Oct;10(10):M111.013284. [PMID: 21890473]
 [3] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Disulfide bond; Redox-active center; Reference proteome; Repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 488 AA 
Protein Sequence
MRIITAPASK VSRGSNELMI LARRSDRGSP TSPAHSLSRK SPIMYPSTTM ANAPGLVSCT 60
FFLAVNGLYS SSDDVIELTP SNFNREVIQS DSLWLVEFYA PWCGHCQRLT PEWKKAATAL 120
KDVVKVGAVD ADKHHSLGGQ YGVQGFPTIK IFGSNKNRPE DYQGGRTGEA IVDAALSALR 180
QLVKDRLGGR SGGYSSGKQG RSDSSSKKDV IELTDDSFDK NVLDSEDVWM VEFYAPWCGH 240
CKNLEPEWAA AASEVKEQTK GKVKLAAVDA TVNQVLASRY GIRGFPTIKI FQKGESPVDY 300
DGGRTRSDIV SRALDLFSDN APPPELLEII NEDIAKRTCE EHQLCVVAVL PHILDTGAAG 360
RNSYLEVLLK LADKYKKKMW GWLWTEAGAQ SELETALGIG GFGYPAMAAI NARKMKFALL 420
KGSFSEQGIN EFLRELSFGR GSTAPVGGGA FPTIVEREPW DGRDGELPVE DDIDLSDVEL 480
DDLGKDEL 488 
Gene Ontology
 GO:0009055; F:electron carrier activity; IEA:InterPro.
 GO:0016853; F:isomerase activity; IEA:InterPro.
 GO:0015035; F:protein disulfide oxidoreductase activity; IEA:InterPro.
 GO:0045454; P:cell redox homeostasis; IEA:InterPro.
 GO:0006662; P:glycerol ether metabolic process; IEA:InterPro. 
Interpro
 IPR005788; Disulphide_isomerase.
 IPR005746; Thioredoxin.
 IPR012336; Thioredoxin-like_fold.
 IPR017937; Thioredoxin_CS.
 IPR013766; Thioredoxin_domain. 
Pfam
 PF00085; Thioredoxin 
SMART
  
PROSITE
 PS00194; THIOREDOXIN_1
 PS51352; THIOREDOXIN_2 
PRINTS
 PR00421; THIOREDOXIN.