CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007322
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Autophagy-related protein 3 
Protein Synonyms/Alias
 Autophagy-related E2-like conjugation enzyme ATG3 
Gene Name
 ATG3 
Gene Synonyms/Alias
 APG3; AUT1; YNR007C; N2040 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
19YLTPITHKSTFLTTGacetylation[1]
48CHMFPTWKWNEESSDacetylation[1]
183STSYRVPKMYIVGFNacetylation[1]
Reference
 [1] Function and molecular mechanism of acetylation in autophagy regulation.
 Yi C, Ma M, Ran L, Zheng J, Tong J, Zhu J, Ma C, Sun Y, Zhang S, Feng W, Zhu L, Le Y, Gong X, Yan X, Hong B, Jiang FJ, Xie Z, Miao D, Deng H, Yu L.
 Science. 2012 Apr 27;336(6080):474-7. [PMID: 22539722
Functional Description
 E2 conjugating enzyme responsible for the E2-like covalent binding of phosphatidylethanolamine to the C-terminal Gly of ATG8. This step is required for the membrane association of ATG8. The formation of the ATG8-phosphatidylethanolamine conjugate is essential for autophagy and for the cytoplasm to vacuole transport (Cvt). 
Sequence Annotation
 ACT_SITE 234 234 Glycyl thioester intermediate  
Keyword
 3D-structure; Autophagy; Complete proteome; Cytoplasm; Protein transport; Reference proteome; Transport; Ubl conjugation pathway. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 310 AA 
Protein Sequence
MIRSTLSSWR EYLTPITHKS TFLTTGQITP EEFVQAGDYL CHMFPTWKWN EESSDISYRD 60
FLPKNKQFLI IRKVPCDKRA EQCVEVEGPD VIMKGFAEDG DEDDVLEYIG SETEHVQSTP 120
AGGTKDSSID DIDELIQDME IKEEDENDDT EEFNAKGGLA KDMAQERYYD LYIAYSTSYR 180
VPKMYIVGFN SNGSPLSPEQ MFEDISADYR TKTATIEKLP FYKNSVLSVS IHPCKHANVM 240
KILLDKVRVV RQRRRKELQE EQELDGVGDW EDLQDDIDDS LRVDQYLIVF LKFITSVTPS 300
IQHDYTMEGW 310 
Gene Ontology
 GO:0005829; C:cytosol; IDA:UniProtKB.
 GO:0019776; F:Atg8 ligase activity; IMP:SGD.
 GO:0000045; P:autophagic vacuole assembly; IMP:UniProtKB.
 GO:0006501; P:C-terminal protein lipidation; IDA:SGD.
 GO:0032258; P:CVT pathway; IMP:SGD.
 GO:0000422; P:mitochondrion degradation; IMP:SGD.
 GO:0034727; P:piecemeal microautophagy of nucleus; IMP:SGD.
 GO:0006612; P:protein targeting to membrane; IMP:UniProtKB. 
Interpro
 IPR007135; Autophagy-rel_prot_3.
 IPR019461; Autophagy-rel_prot_3_C.
 IPR007134; Autophagy-rel_prot_3_N. 
Pfam
 PF03987; Autophagy_act_C
 PF10381; Autophagy_Cterm
 PF03986; Autophagy_N 
SMART
  
PROSITE
  
PRINTS