CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-007983
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 mRNA decay factor CTH1 
Protein Synonyms/Alias
 Cysteine-three-histidine protein 1 
Gene Name
 CTH1 
Gene Synonyms/Alias
 YDR151C; YD8358.07C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
253KPCINWSKLGYCPYGubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Binds to specific AU-rich elements (ARE) in the 3'- untranslated region of target mRNAs and promotes their degradation. In response to iron deficiency, promotes the decay of many mRNAs encoding proteins involved in iron-dependent pathways. Negatively regulates primarily iron-dependent mitochondrial processes including respiration and amino acid biosynthesis. 
Sequence Annotation
 ZN_FING 204 232 C3H1-type 1.
 ZN_FING 242 270 C3H1-type 2.  
Keyword
 Complete proteome; Metal-binding; Reference proteome; Repeat; RNA-binding; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 325 AA 
Protein Sequence
MMPNVAPNSY YLNIPNANST STTTSSIFSD LNKEYESKIK EIEEYYIKTL LNENTDNDDS 60
SSSEGHNINE TDILSEYSPR PSPWLPSKPN CYHPLGDFKD LIISDSRPTN TLPINNPFAG 120
NNNISTLATT EKKRKKRSLE VEINPTYTTS AFSLPLTAEN LQKLSQVDSQ STGLPYTLPI 180
QKTTKLEPCR RAPLQLPQLV NKTLYKTELC ESFTIKGYCK YGNKCQFAHG LNELKFKKKS 240
NNYRTKPCIN WSKLGYCPYG KRCCFKHGDD KDVEIYQNAN DGRSKDTALT PLPTSLAPSN 300
NDNITNLSKP RNLHTSVKAL QRMTW 325 
Gene Ontology
 GO:0005634; C:nucleus; IC:SGD.
 GO:0003729; F:mRNA binding; ISS:SGD.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006879; P:cellular iron ion homeostasis; IGI:SGD.
 GO:0000956; P:nuclear-transcribed mRNA catabolic process; IGI:SGD. 
Interpro
 IPR000571; Znf_CCCH. 
Pfam
 PF00642; zf-CCCH 
SMART
 SM00356; ZnF_C3H1 
PROSITE
 PS50103; ZF_C3H1 
PRINTS