CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-010564
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Histone H3.2 
Protein Synonyms/Alias
 Histone H3 class I 
Gene Name
 H3-I; H3-II; H3-III; H3-IV; H3-V; H3-VI; H3-VII; H3-VIII 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Gallus gallus (Chicken) 
NCBI Taxa ID
 9031 
Lysine Modification
Position
Peptide
Type
References
5***MARTKQTARKSTacetylation[1]
10RTKQTARKSTGGKAPacetylation[1]
15ARKSTGGKAPRKQLAacetylation[1]
19TGGKAPRKQLATKAAacetylation[1, 2]
24PRKQLATKAARKSAPacetylation[1, 2]
Reference
 [1] Histone accessibility determined by lysine-specific acetylation in chicken erythrocyte nuclei.
 Lewis PN, Guillemette JG, Chan S.
 Eur J Biochem. 1988 Feb 15;172(1):135-45. [PMID: 3126068]
 [2] Analysis of core histones by liquid chromatography-mass spectrometry and peptide mapping.
 Zhang K, Tang H.
 J Chromatogr B Analyt Technol Biomed Life Sci. 2003 Jan 5;783(1):173-9. [PMID: 12450536
Functional Description
 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. 
Sequence Annotation
 MOD_RES 3 3 Asymmetric dimethylarginine; by PRMT6 (By
 MOD_RES 4 4 Phosphothreonine; by GSG2 (By
 MOD_RES 5 5 Allysine; alternate (By similarity).
 MOD_RES 5 5 N6,N6,N6-trimethyllysine; alternate.
 MOD_RES 5 5 N6,N6-dimethyllysine; alternate.
 MOD_RES 5 5 N6-acetyllysine; alternate (By
 MOD_RES 5 5 N6-methyllysine.
 MOD_RES 7 7 Phosphothreonine; by PKC (By similarity).
 MOD_RES 10 10 N6,N6,N6-trimethyllysine; alternate.
 MOD_RES 10 10 N6,N6-dimethyllysine; alternate.
 MOD_RES 10 10 N6-methyllysine; alternate.
 MOD_RES 11 11 Phosphoserine; by AURKB, AURKC, RPS6KA3,
 MOD_RES 12 12 Phosphothreonine; by PKC (By similarity).
 MOD_RES 15 15 N6,N6-dimethyllysine; alternate.
 MOD_RES 15 15 N6-acetyllysine; alternate.
 MOD_RES 18 18 Asymmetric dimethylarginine (By
 MOD_RES 19 19 N6-acetyllysine; alternate.
 MOD_RES 19 19 N6-methylated lysine; alternate (By
 MOD_RES 24 24 N6-acetyllysine.
 MOD_RES 28 28 N6-acetyllysine; alternate (By
 MOD_RES 28 28 N6-methylated lysine; alternate.
 MOD_RES 29 29 Phosphoserine; by AURKB, AURKC and
 MOD_RES 37 37 N6-acetyllysine; alternate (By
 MOD_RES 37 37 N6-methylated lysine; alternate.
 MOD_RES 42 42 Phosphotyrosine (By similarity).
 MOD_RES 58 58 Phosphoserine (By similarity).
 MOD_RES 65 65 N6-methylated lysine (By similarity).
 MOD_RES 80 80 N6,N6-dimethyllysine; alternate.
 MOD_RES 80 80 N6-methyllysine; alternate.
 MOD_RES 81 81 Phosphothreonine (By similarity).
 MOD_RES 123 123 N6-methylated lysine (By similarity).  
Keyword
 3D-structure; Acetylation; Chromosome; Complete proteome; Direct protein sequencing; DNA-binding; Methylation; Nucleosome core; Nucleus; Phosphoprotein; Reference proteome; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 136 AA 
Protein Sequence
MARTKQTARK STGGKAPRKQ LATKAARKSA PATGGVKKPH RYRPGTVALR EIRRYQKSTE 60
LLIRKLPFQR LVREIAQDFK TDLRFQSSAV MALQEASEAY LVGLFEDTNL CAIHAKRVTI 120
MPKDIQLARR IRGERA 136 
Gene Ontology
 GO:0000786; C:nucleosome; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
 GO:0006334; P:nucleosome assembly; IEA:InterPro. 
Interpro
 IPR009072; Histone-fold.
 IPR007125; Histone_core_D.
 IPR000164; Histone_H3. 
Pfam
 PF00125; Histone 
SMART
 SM00428; H3 
PROSITE
 PS00322; HISTONE_H3_1
 PS00959; HISTONE_H3_2 
PRINTS
 PR00622; HISTONEH3.