CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-011178
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 U3 small nucleolar RNA-associated protein 15 
Protein Synonyms/Alias
 U3 snoRNA-associated protein 15; U three protein 15; U3 protein 15 required for transcription; t-UTP15 
Gene Name
 UTP15 
Gene Synonyms/Alias
 YMR093W; YM9582.18 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
81IKTFSRFKDVVYSASubiquitination[1]
Reference
 [1] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 Involved in nucleolar processing of pre-18S ribosomal RNA. Required for optimal pre-ribosomal RNA transcription by RNA polymerase I together with a subset of U3 proteins required for transcription (t-UTPs). 
Sequence Annotation
 REPEAT 37 78 WD 1.
 REPEAT 79 118 WD 2.
 REPEAT 124 162 WD 3.
 REPEAT 166 206 WD 4.
 REPEAT 210 247 WD 5.
 REPEAT 250 294 WD 6.  
Keyword
 Complete proteome; Nucleus; Reference proteome; Repeat; Ribonucleoprotein; Ribosome biogenesis; rRNA processing; Transcription; WD repeat. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 513 AA 
Protein Sequence
MSTARPRIIT SKAPLLPQQT TPEQRYWRQY TSAQLVKEHN SVTHISFNPQ HPHDFAVTSS 60
TRVQIFSSRT RQVIKTFSRF KDVVYSASFR SDGKLLCAGD ATGLVSVYDS YNPRTILLSI 120
NASTHPTHVT KFHTQDNKIL ATASDDRVTR LWDISNAYEP QLELTGATDY VRTLSFIPAA 180
PHLVATGSYD GLIRLYDTRS SGSTPIYSLN HDQPVENVIA VSPTQIVSCG GNNFKVWDLT 240
SNKKLYERGN FNKAVTCLDY VENFDSPMQS ALIASSLDGH VKVFDPLDNF QVKFGWKFSG 300
PVLSCAVSPS TAQGNRHLVA GLSSGLLAIR TKKKEKRSSD KENAPASFNK NAKSNNFQRM 360
MRGSEYQGDQ EHIIHNDKVR SQRRMRAFER NINQFKWSEA LDNAFVPGMA KELTLTVLQE 420
LRKRGKVRVA LYGRDESTLE PLLNWCLKGI EDVRSASIVA DWVAVVLELY GNTLESSPVL 480
QELMIDLKTK VRHEIHKSKE AQRIEGMLQL LTS 513 
Gene Ontology
 GO:0033553; C:rDNA heterochromatin; IDA:SGD.
 GO:0032040; C:small-subunit processome; IDA:SGD.
 GO:0034455; C:t-UTP complex; IDA:SGD.
 GO:0030515; F:snoRNA binding; IPI:SGD.
 GO:0000462; P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
 GO:0045943; P:positive regulation of transcription from RNA polymerase I promoter; IMP:SGD.
 GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. 
Interpro
 IPR018983; U3_snoRNA-assocProt_15_C.
 IPR015943; WD40/YVTN_repeat-like_dom.
 IPR001680; WD40_repeat.
 IPR019775; WD40_repeat_CS.
 IPR017986; WD40_repeat_dom. 
Pfam
 PF09384; UTP15_C
 PF00400; WD40 
SMART
 SM00320; WD40 
PROSITE
 PS00678; WD_REPEATS_1
 PS50082; WD_REPEATS_2
 PS50294; WD_REPEATS_REGION 
PRINTS