CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-043795
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Collagen alpha-2(VI) chain 
Protein Synonyms/Alias
  
Gene Name
 COL6A2 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
245IDSLSSFKEAVKN**ubiquitination[1]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 250 AA 
Protein Sequence
GNKGAKGDRG LPGPRGPQGA LGEPGKQGSR GDPGDAGPRG DSGQPGPKGD PGRPGFSYPG 60
PRGAPGEKGE PGPRGPEGGR GDFGLKGEPG RKGEKGEPAD PGPPGEPGPR GPRGVPGPEG 120
EPGPPGDPGL TECDVMTYVR ETCGCCGSEV SPVPPDDPAT PPDCEKRCGA LDVVFVIDSS 180
ESIGYTNFTL EKNFVINVVN RLGAIAKDPK SETGTRVGVV QYSHEGTFEA IQLDDERIDS 240
LSSFKEAVKN 250 
Gene Ontology
  
Interpro
 IPR008160; Collagen.
 IPR002035; VWF_A. 
Pfam
 PF01391; Collagen
 PF00092; VWA 
SMART
  
PROSITE
 PS50234; VWFA 
PRINTS