CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029963
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Apoptosis-inducing factor 1, mitochondrial 
Protein Synonyms/Alias
  
Gene Name
 Aifm1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
104LGLSPEEKQRRAIASacetylation[1]
104LGLSPEEKQRRAIASsuccinylation[1]
104LGLSPEEKQRRAIASubiquitination[2]
184SDDPNVTKTLQFRQWubiquitination[2]
239DVRGNMVKLNDGSQIacetylation[3, 4]
273DRAGAEVKSRTTLFRacetylation[4]
332VIQLFPEKGNMGKILacetylation[4]
337PEKGNMGKILPQYLSacetylation[4]
357KVKREGVKVMPNAIVacetylation[4]
377SGGRLLIKLKDGRKVacetylation[4]
383IKLKDGRKVETDHIVacetylation[5]
403EPNVELAKTGGLEIDacetylation[4]
441AACFYDIKLGRRRVEacetylation[5]
513ATAQDNPKSATEQSGubiquitination[2]
585NRMPIARKIIKDGEQacetylation[5]
588PIARKIIKDGEQHEDacetylation[4, 5, 6]
Reference
 [1] SIRT5-Mediated Lysine Desuccinylation Impacts Diverse Metabolic Pathways.
 Park J, Chen Y, Tishkoff DX, Peng C, Tan M, Dai L, Xie Z, Zhang Y, Zwaans BM, Skinner ME, Lombard DB, Zhao Y.
 Mol Cell. 2013 Jun 27;50(6):919-30. [PMID: 23806337]
 [2] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [3] Proteomic investigations of lysine acetylation identify diverse substrates of mitochondrial deacetylase sirt3.
 Sol EM, Wagner SA, Weinert BT, Kumar A, Kim HS, Deng CX, Choudhary C.
 PLoS One. 2012;7(12):e50545. [PMID: 23236377]
 [4] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [5] Label-free quantitative proteomics of the lysine acetylome in mitochondria identifies substrates of SIRT3 in metabolic pathways.
 Rardin MJ, Newman JC, Held JM, Cusack MP, Sorensen DJ, Li B, Schilling B, Mooney SD, Kahn CR, Verdin E, Gibson BW.
 Proc Natl Acad Sci U S A. 2013 Apr 16;110(16):6601-6. [PMID: 23576753]
 [6] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 608 AA 
Protein Sequence
MFRCGGLAGA FKQKLVPLVR TVYVQRPKQR NRLPVVQCHL LGSPSRTLAS AGASGKDGSS 60
LVYFLIVGAT VTGAGIYYAY KTIKEDQKRY NERVMGLGLS PEEKQRRAIA SATEGGSVPQ 120
IRAPSHVPFL LIGGGTAAFA AARSIRARDP GARVLIVSED PELPYMRPPL SKELWFSDDP 180
NVTKTLQFRQ WNGKERSIYF QPPSFYVSAQ DLPNIENGGV AVLTGKKVVH LDVRGNMVKL 240
NDGSQITFEK CLIATGGTPR SLSAIDRAGA EVKSRTTLFR KIGDFRALEK ISREVKSITV 300
IGGGFLGSEL ACALGRKSQA SGIEVIQLFP EKGNMGKILP QYLSNWTMEK VKREGVKVMP 360
NAIVQSVGVS GGRLLIKLKD GRKVETDHIV TAVGLEPNVE LAKTGGLEID SDFGGFRVNA 420
ELQARSNIWV AGDAACFYDI KLGRRRVEHH DHAVVSGRLA GENMTGAAKP YWHQSMFWSD 480
LGPDVGYEAI GLVDSSLPTV GVFAKATAQD NPKSATEQSG TGIRSESETE SEASEITIPP 540
SAPAVPQVPV EGEDYGKGVI FYLRDKVVVG IVLWNVFNRM PIARKIIKDG EQHEDLNEVA 600
KLFNIHED 608 
Gene Ontology
 GO:0005829; C:cytosol; IDA:MGI.
 GO:0005758; C:mitochondrial intermembrane space; TAS:MGI.
 GO:0005741; C:mitochondrial outer membrane; TAS:MGI.
 GO:0005634; C:nucleus; IDA:MGI.
 GO:0004174; F:electron-transferring-flavoprotein dehydrogenase activity; TAS:MGI.
 GO:0050660; F:flavin adenine dinucleotide binding; IEA:InterPro.
 GO:0006309; P:apoptotic DNA fragmentation; IGI:MGI.
 GO:0008637; P:apoptotic mitochondrial changes; TAS:MGI.
 GO:0045454; P:cell redox homeostasis; IEA:InterPro.
 GO:0051402; P:neuron apoptotic process; IGI:MGI. 
Interpro
 IPR016156; FAD/NAD-linked_Rdtase_dimer.
 IPR013027; FAD_pyr_nucl-diS_OxRdtase.
 IPR004099; Pyr_nucl-diS_OxRdtase_dimer.
 IPR023753; Pyr_nucl-diS_OxRdtase_FAD/NAD.
 IPR001327; Pyr_OxRdtase_NAD-bd_dom. 
Pfam
 PF00070; Pyr_redox
 PF07992; Pyr_redox_2 
SMART
  
PROSITE
  
PRINTS
 PR00368; FADPNR.