CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016156
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Amphoterin-induced protein 2 
Protein Synonyms/Alias
 AMIGO-2; Alivin-1; Differentially expressed in gastric adenocarcinomas; DEGA 
Gene Name
 AMIGO2 
Gene Synonyms/Alias
 ALI1 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
432KCKTKRQKNMLHQSNubiquitination[1]
473VVFLEPLKDTAAGQNubiquitination[1]
482TAAGQNGKVRLFPSEubiquitination[1]
498VIAEGILKSTRGKSDubiquitination[1]
Reference
 [1] Systems-wide analysis of ubiquitylation dynamics reveals a key role for PAF15 ubiquitylation in DNA-damage bypass.
 Povlsen LK, Beli P, Wagner SA, Poulsen SL, Sylvestersen KB, Poulsen JW, Nielsen ML, Bekker-Jensen S, Mailand N, Choudhary C.
 Nat Cell Biol. 2012 Oct;14(10):1089-98. [PMID: 23000965
Functional Description
 Required for depolarization-dependent survival of cultured cerebellar granule neurons. May mediate homophilic as well as heterophilic cell-cell interaction with AMIGO1 or AMIGO3. May contribute to signal transduction through its intracellular domain. May be required for tumorigenesis of a subset of gastric adenocarcinomas. 
Sequence Annotation
 DOMAIN 40 68 LRRNT.
 REPEAT 69 90 LRR 1.
 REPEAT 94 115 LRR 2.
 REPEAT 118 139 LRR 3.
 REPEAT 142 163 LRR 4.
 REPEAT 166 187 LRR 5.
 REPEAT 193 214 LRR 6.
 DOMAIN 228 284 LRRCT.
 DOMAIN 289 379 Ig-like C2-type.
 CARBOHYD 58 58 N-linked (GlcNAc...) (Potential).
 CARBOHYD 104 104 N-linked (GlcNAc...) (Potential).
 CARBOHYD 281 281 N-linked (GlcNAc...) (Potential).
 CARBOHYD 288 288 N-linked (GlcNAc...) (Potential).
 CARBOHYD 345 345 N-linked (GlcNAc...) (Potential).
 CARBOHYD 373 373 N-linked (GlcNAc...) (Potential).
 CARBOHYD 381 381 N-linked (GlcNAc...) (Potential).
 CARBOHYD 384 384 N-linked (GlcNAc...) (Potential).
 DISULFID 41 47 By similarity.
 DISULFID 45 54 By similarity.
 DISULFID 232 260 By similarity.
 DISULFID 234 282 By similarity.
 DISULFID 310 363 By similarity.  
Keyword
 Cell adhesion; Cell membrane; Complete proteome; Disulfide bond; Glycoprotein; Immunoglobulin domain; Leucine-rich repeat; Membrane; Nucleus; Reference proteome; Repeat; Signal; Transmembrane; Transmembrane helix. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 522 AA 
Protein Sequence
MSLRVHTLPT LLGAVVRPGC RELLCLLMIT VTVGPGASGV CPTACICATD IVSCTNKNLS 60
KVPGNLFRLI KRLDLSYNRI GLLDSEWIPV SFAKLNTLIL RHNNITSIST GSFSTTPNLK 120
CLDLSSNKLK TVKNAVFQEL KVLEVLLLYN NHISYLDPSA FGGLSQLQKL YLSGNFLTQF 180
PMDLYVGRFK LAELMFLDVS YNRIPSMPMH HINLVPGKQL RGIYLHGNPF VCDCSLYSLL 240
VFWYRRHFSS VMDFKNDYTC RLWSDSRHSR QVLLLQDSFM NCSDSIINGS FRALGFIHEA 300
QVGERLMVHC DSKTGNANTD FIWVGPDNRL LEPDKEMENF YVFHNGSLVI ESPRFEDAGV 360
YSCIAMNKQR LLNETVDVTI NVSNFTVSRS HAHEAFNTAF TTLAACVASI VLVLLYLYLT 420
PCPCKCKTKR QKNMLHQSNA HSSILSPGPA SDASADERKA GAGKRVVFLE PLKDTAAGQN 480
GKVRLFPSEA VIAEGILKST RGKSDSDSVN SVFSDTPFVA ST 522 
Gene Ontology
 GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
 GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
 GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
 GO:0007157; P:heterophilic cell-cell adhesion; ISS:UniProtKB.
 GO:0007156; P:homophilic cell adhesion; ISS:UniProtKB.
 GO:0043066; P:negative regulation of apoptotic process; IEA:Compara.
 GO:0043069; P:negative regulation of programmed cell death; ISS:UniProtKB. 
Interpro
 IPR000483; Cys-rich_flank_reg_C.
 IPR007110; Ig-like_dom.
 IPR013783; Ig-like_fold.
 IPR003599; Ig_sub.
 IPR001611; Leu-rich_rpt.
 IPR003591; Leu-rich_rpt_typical-subtyp.
 IPR000372; LRR-contain_N. 
Pfam
 PF00560; LRR_1 
SMART
 SM00409; IG
 SM00369; LRR_TYP
 SM00082; LRRCT
 SM00013; LRRNT 
PROSITE
 PS50835; IG_LIKE
 PS51450; LRR 
PRINTS