CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-002193
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Major prion protein 
Protein Synonyms/Alias
 PrP; PrP27-30; PrP33-35C; CD230 
Gene Name
 Prnp 
Gene Synonyms/Alias
 Prn-p; Prp 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
203NFTETDVKMMERVVEubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023
Functional Description
 May play a role in neuronal development and synaptic plasticity. May be required for neuronal myelin sheath maintenance. May play a role in iron uptake and iron homeostasis. Soluble oligomers are toxic to cultured neuroblastoma cells and induce apoptosis (in vitro) (By similarity). Association with GPC1 (via its heparan sulfate chains) targets PRNP to lipid rafts. Also provides Cu(2+) or ZN(2+) for the ascorbate-mediated GPC1 deaminase degradation of its heparan sulfate side chains. 
Sequence Annotation
 REPEAT 51 58 1.
 REPEAT 59 66 2.
 REPEAT 67 74 3.
 REPEAT 75 82 4.
 REPEAT 83 90 5.
 REGION 23 231 Interaction with GRB2, ERI3 and SYN1.
 REGION 51 90 5 X 8 AA tandem repeats of P-H-G-G-G-W-G-
 METAL 60 60 Copper or zinc 1 (By similarity).
 METAL 61 61 Copper or zinc 1; via amide nitrogen (By
 METAL 62 62 Copper or zinc 1; via amide nitrogen and
 METAL 68 68 Copper or zinc 2 (By similarity).
 METAL 69 69 Copper or zinc 2; via amide nitrogen (By
 METAL 70 70 Copper or zinc 2; via amide nitrogen and
 METAL 76 76 Copper or zinc 3 (By similarity).
 METAL 77 77 Copper or zinc 3; via amide nitrogen (By
 METAL 78 78 Copper or zinc 3; via amide nitrogen and
 METAL 84 84 Copper or zinc 4 (By similarity).
 METAL 85 85 Copper or zinc 4; via amide nitrogen (By
 METAL 86 86 Copper or zinc 4; via amide nitrogen and
 MOD_RES 44 44 Hydroxyproline.
 LIPID 230 230 GPI-anchor amidated serine (By
 CARBOHYD 180 180 N-linked (GlcNAc...) (Probable).
 CARBOHYD 196 196 N-linked (GlcNAc...).
 DISULFID 178 213  
Keyword
 3D-structure; Amyloid; Cell membrane; Complete proteome; Copper; Direct protein sequencing; Disulfide bond; Glycoprotein; Golgi apparatus; GPI-anchor; Hydroxylation; Lipoprotein; Membrane; Metal-binding; Polymorphism; Prion; Reference proteome; Repeat; Signal; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 254 AA 
Protein Sequence
MANLGYWLLA LFVTMWTDVG LCKKRPKPGG WNTGGSRYPG QGSPGGNRYP PQGGTWGQPH 60
GGGWGQPHGG SWGQPHGGSW GQPHGGGWGQ GGGTHNQWNK PSKPKTNLKH VAGAAAAGAV 120
VGGLGGYMLG SAMSRPMIHF GNDWEDRYYR ENMYRYPNQV YYRPVDQYSN QNNFVHDCVN 180
ITIKQHTVTT TTKGENFTET DVKMMERVVE QMCVTQYQKE SQAYYDGRRS SSTVLFSSPP 240
VILLISFLIF LIVG 254 
Gene Ontology
 GO:0031225; C:anchored to membrane; IEA:UniProtKB-KW.
 GO:0005783; C:endoplasmic reticulum; IDA:MGI.
 GO:0005794; C:Golgi apparatus; IDA:MGI.
 GO:0045121; C:membrane raft; IDA:MGI.
 GO:0005730; C:nucleolus; IEA:Compara.
 GO:0005886; C:plasma membrane; IDA:UniProtKB.
 GO:0005507; F:copper ion binding; ISS:UniProtKB.
 GO:0006878; P:cellular copper ion homeostasis; TAS:MGI.
 GO:0007611; P:learning or memory; IEA:Compara.
 GO:0046007; P:negative regulation of activated T cell proliferation; IMP:BHF-UCL.
 GO:0043066; P:negative regulation of apoptotic process; IGI:MGI.
 GO:0070885; P:negative regulation of calcineurin-NFAT signaling cascade; IMP:BHF-UCL.
 GO:0032689; P:negative regulation of interferon-gamma production; IMP:BHF-UCL.
 GO:0032700; P:negative regulation of interleukin-17 production; IMP:BHF-UCL.
 GO:0032703; P:negative regulation of interleukin-2 production; IMP:BHF-UCL.
 GO:0001933; P:negative regulation of protein phosphorylation; IMP:BHF-UCL.
 GO:0043433; P:negative regulation of sequence-specific DNA binding transcription factor activity; IMP:BHF-UCL.
 GO:0050860; P:negative regulation of T cell receptor signaling pathway; IMP:BHF-UCL.
 GO:0006139; P:nucleobase-containing compound metabolic process; TAS:MGI.
 GO:0051260; P:protein homooligomerization; IEA:InterPro.
 GO:0046686; P:response to cadmium ion; IEA:Compara.
 GO:0046688; P:response to copper ion; IEA:Compara.
 GO:0006979; P:response to oxidative stress; IDA:MGI. 
Interpro
 IPR000817; Prion.
 IPR022416; Prion/Doppel_prot_b-ribbon_dom.
 IPR025860; Prion_N_dom. 
Pfam
 PF00377; Prion
 PF11587; Prion_bPrPp 
SMART
 SM00157; PRP 
PROSITE
 PS00291; PRION_1
 PS00706; PRION_2 
PRINTS
 PR00341; PRION.