CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-029816
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 AP-4 complex subunit beta-1 
Protein Synonyms/Alias
  
Gene Name
 AP4B1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
41QRVIRMSKLDQWGQAubiquitination[1]
110TDVLVRVKGPLLAACubiquitination[2]
297EDFVENVKSETFPAVubiquitination[1]
362LVGIDEVKRILCSPKubiquitination[1, 2, 3]
369KRILCSPKSDPTLGLubiquitination[3]
401TLVPVYGKAHWATISubiquitination[3]
409AHWATISKCQGAERCubiquitination[2, 3]
438PLIPEENKERVQELPubiquitination[1, 2, 3]
Reference
 [1] Systematic and quantitative assessment of the ubiquitin-modified proteome.
 Kim W, Bennett EJ, Huttlin EL, Guo A, Li J, Possemato A, Sowa ME, Rad R, Rush J, Comb MJ, Harper JW, Gygi SP.
 Mol Cell. 2011 Oct 21;44(2):325-40. [PMID: 21906983]
 [2] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [3] Global identification of modular cullin-RING ligase substrates.
 Emanuele MJ, Elia AE, Xu Q, Thoma CR, Izhar L, Leng Y, Guo A, Chen YN, Rush J, Hsu PW, Yen HC, Elledge SJ.
 Cell. 2011 Oct 14;147(2):459-74. [PMID: 21963094
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 571 AA 
Protein Sequence
MPYLGSEDVV KELKKALCNP HIQADRLRYR NVIQRVIRMS KLDQWGQAEV LNFLLRYQPR 60
SEEELFDILN LLDSFLKSSS PGVVMGATKL FLILAKMFPH VQTDVLVRVK GPLLAACSSE 120
SRELCFVALC HVRQILHSLP GHFSSHYKKF FCSYSEPHYI KLQKVEVLCE LVNDENVQQV 180
LEELRGYCTD VSADFAQAAI FAIGGIARTY TDQCVQILTE LLGLRQEHIT TVVVQTFRDL 240
VWLCPQCTEA VCQALPGCEE NIQDSEGKQA LIWLLGVHGE RIPNAPYVLE DFVENVKSET 300
FPAVKMELLT ALLRLFLSRP AECQDMLGRL LYYCIEEEKD MAVRDRGLFY YRLLLVGIDE 360
VKRILCSPKS DPTLGLLEDP AERPVNSWAS DFNTLVPVYG KAHWATISKC QGAERCDPEL 420
PKTSSFAASG PLIPEENKER VQELPDSGAL MLVPNRQLTA DYFEKTWLSL KVAHQQVLPW 480
RGEFHPDTLQ MALQVVNIQT IAMSRAGSRP WKAYLSAQDD TGCLFLTELL LEPGNSEMQI 540
SVKQNEARTE TLNSFISVLE TVIGTIEEIK S 571 
Gene Ontology
 GO:0030131; C:clathrin adaptor complex; IEA:InterPro.
 GO:0008565; F:protein transporter activity; IEA:InterPro.
 GO:0006886; P:intracellular protein transport; IEA:InterPro.
 GO:0016192; P:vesicle-mediated transport; IEA:InterPro. 
Interpro
 IPR026739; AP_beta.
 IPR016342; AP_complex_bsu_1_2_4.
 IPR011989; ARM-like.
 IPR016024; ARM-type_fold.
 IPR015151; B-adaptin_app_sub_C.
 IPR012295; Beta2_adaptin/TBP_C_dom.
 IPR002553; Clathrin/coatomer_adapt-like_N. 
Pfam
 PF01602; Adaptin_N
 PF09066; B2-adapt-app_C 
SMART
 SM01020; B2-adapt-app_C 
PROSITE
  
PRINTS