CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-045214
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
  
Protein Name
 Zinc finger protein 550 
Protein Synonyms/Alias
  
Gene Name
 ZNF550 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
54EGLLEMQKGKVTPETubiquitination[1]
71HKETHLGKVSLEGEGubiquitination[1]
132CGKGFNRKWYLVRHQubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961] 
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 339 AA 
Protein Sequence
XDRAQVHTRE PTTYPPVLSE RAFLRGSLTL ESSTSSDSRL GRARDEEGLL EMQKGKVTPE 60
TDLHKETHLG KVSLEGEGLG TDDGLHSRAL QEWLSADVLH ECDSQQPGKD ALIHAGTNPY 120
KCKQCGKGFN RKWYLVRHQR VHTGMKPYEC NACGKAFSQS STLIRHYLIH TGEKPYKCLE 180
CGKAFKRRSY LMQHHPIHTG EKPYECSQCR KAFTHRSTFI RHNRTHTGEK PFECKECEKA 240
FSNRAHLIQH YIIHTGEKPY DCMACGKAFR CSSELIQHQR IHTGEKPYEC TQCGKAFHRS 300
TYLIQHSVIH TGEMPYKCIE CGKAFKRRSH LLQHQRVHT 339 
Gene Ontology
 GO:0003676; F:nucleic acid binding; IEA:InterPro.
 GO:0008270; F:zinc ion binding; IEA:InterPro. 
Interpro
 IPR007087; Znf_C2H2.
 IPR015880; Znf_C2H2-like.
 IPR013087; Znf_C2H2/integrase_DNA-bd. 
Pfam
  
SMART
 SM00355; ZnF_C2H2 
PROSITE
 PS00028; ZINC_FINGER_C2H2_1
 PS50157; ZINC_FINGER_C2H2_2 
PRINTS