CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-019663
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 RUN and FYVE domain-containing protein 1 
Protein Synonyms/Alias
 FYVE-finger protein EIP1; La-binding protein 1; Rab4-interacting protein; Zinc finger FYVE domain-containing protein 12 
Gene Name
 RUFY1 
Gene Synonyms/Alias
 RABIP4; ZFYVE12 
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
63KSFIGQNKSFFGPLEubiquitination[1]
200ITDVLDQKNYVEELNubiquitination[1]
Reference
 [1] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661
Functional Description
 Binds phospholipid vesicles containing phosphatidylinositol 3-phosphate and participates in early endosomal trafficking. 
Sequence Annotation
 DOMAIN 139 271 RUN.
 ZN_FING 642 700 FYVE-type.
 REGION 615 625 Interaction with RAB4 (By similarity).
 MOD_RES 389 389 Phosphotyrosine.
 MOD_RES 400 400 Phosphotyrosine.  
Keyword
 3D-structure; Alternative splicing; Coiled coil; Complete proteome; Cytoplasm; Endocytosis; Endosome; Lipid-binding; Membrane; Metal-binding; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Transport; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 708 AA 
Protein Sequence
MMEERANLMH MMKLSIKVLL QSALSLGRSL DADHAPLQQF FVVMEHCLKH GLKVKKSFIG 60
QNKSFFGPLE LVEKLCPEAS DIATSVRNLP ELKTAVGRGR AWLYLALMQK KLADYLKVLI 120
DNKHLLSEFY EPEALMMEEE GMVIVGLLVG LNVLDANLCL KGEDLDSQVG VIDFSLYLKD 180
VQDLDGGKEH ERITDVLDQK NYVEELNRHL SCTVGDLQTK IDGLEKTNSK LQEELSAATD 240
RICSLQEEQQ QLREQNELIR ERSEKSVEIT KQDTKVELET YKQTRQGLDE MYSDVWKQLK 300
EEKKVRLELE KELELQIGMK TEMEIAMKLL EKDTHEKQDT LVALRQQLEE VKAINLQMFH 360
KAQNAESSLQ QKNEAITSFE GKTNQVMSSM KQMEERLQHS ERARQGAEER SHKLQQELGG 420
RIGALQLQLS QLHEQCSSLE KELKSEKEQR QALQRELQHE KDTSSLLRME LQQVEGLKKE 480
LRELQDEKAE LQKICEEQEQ ALQEMGLHLS QSKLKMEDIK EVNQALKGHA WLKDDEATHC 540
RQCEKEFSIS RRKHHCRNCG HIFCNTCSSN ELALPSYPKP VRVCDSCHTL LLQRCSSTAS 600 
Gene Ontology
 GO:0031901; C:early endosome membrane; IEA:UniProtKB-SubCell.
 GO:0008289; F:lipid binding; IEA:UniProtKB-KW.
 GO:0008565; F:protein transporter activity; IEA:Compara.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0006897; P:endocytosis; IEA:UniProtKB-KW.
 GO:0030100; P:regulation of endocytosis; IEA:Compara. 
Interpro
 IPR004012; Run.
 IPR000306; Znf_FYVE.
 IPR017455; Znf_FYVE-rel.
 IPR011011; Znf_FYVE_PHD.
 IPR001841; Znf_RING.
 IPR013083; Znf_RING/FYVE/PHD. 
Pfam
 PF01363; FYVE
 PF02759; RUN 
SMART
 SM00064; FYVE
 SM00593; RUN 
PROSITE
 PS50826; RUN
 PS50178; ZF_FYVE 
PRINTS