CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-006433
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 ADP-ribosylation factor GTPase-activating protein GCS1 
Protein Synonyms/Alias
 ARF GAP GCS1 
Gene Name
 GCS1 
Gene Synonyms/Alias
 YDL226C 
Created Date
 July 27, 2013 
Organism
 Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Baker's yeast) 
NCBI Taxa ID
 559292 
Lysine Modification
Position
Peptide
Type
References
19RRLLQLQKIGANKKCacetylation[1]
40NPQWATPKFGAFICLubiquitination[2]
72SITMDQFKPEELLRMacetylation[1]
182SNGANFQKEKNEAYFubiquitination[2]
210LPPSQGGKYQGFGSTubiquitination[2]
220GFGSTPAKPPQERSAubiquitination[2]
286GELSEETKRAAAQFGubiquitination[2]
334TTHTEYQKIDNNDKKubiquitination[2]
348KNEQDEDKWDDF***ubiquitination[2]
Reference
 [1] Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae.
 Henriksen P, Wagner SA, Weinert BT, Sharma S, Bacinskaja G, Rehman M, Juffer AH, Walther TC, Lisby M, Choudhary C.
 Mol Cell Proteomics. 2012 Nov;11(11):1510-22. [PMID: 22865919]
 [2] Global analysis of phosphorylation and ubiquitylation cross-talk in protein degradation.
 Swaney DL, Beltrao P, Starita L, Guo A, Rush J, Fields S, Krogan NJ, VillĂ©n J.
 Nat Methods. 2013 Jul;10(7):676-82. [PMID: 23749301
Functional Description
 GTPase-activating protein (GAP) for ARF1 and ARF2. Involved in intracellular vesicular transport. Required for transport from the trans-Golgi network. Implicated in the regulation of retrograde transport from the Golgi to the ER and in actin cytoskeletal organization. May be involved in the maintenance of mitochondrial morphology, possibly through organizing the actin cytoskeleton in Saccharomyces. 
Sequence Annotation
 DOMAIN 11 127 Arf-GAP.
 ZN_FING 26 49 C4-type.
 MOD_RES 151 151 Phosphothreonine.
 MOD_RES 157 157 Phosphoserine.
 MOD_RES 161 161 Phosphothreonine.
 MOD_RES 168 168 Phosphoserine.
 MOD_RES 170 170 Phosphothreonine.
 MOD_RES 260 260 Phosphoserine.  
Keyword
 Complete proteome; Cytoplasm; Golgi apparatus; GTPase activation; Metal-binding; Mitochondrion; Phosphoprotein; Protein transport; Reference proteome; Transport; Zinc; Zinc-finger. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 352 AA 
Protein Sequence
MSDWKVDPDT RRRLLQLQKI GANKKCMDCG APNPQWATPK FGAFICLECA GIHRGLGVHI 60
SFVRSITMDQ FKPEELLRME KGGNEPLTEW FKSHNIDLSL PQKVKYDNPV AEDYKEKLTC 120
LCEDRVFEER EHLDFDASKL SATSQTAASA TPGVAQSREG TPLENRRSAT PANSSNGANF 180
QKEKNEAYFA ELGKKNQSRP DHLPPSQGGK YQGFGSTPAK PPQERSAGSS NTLSLENFQA 240
DPLGTLSRGW GLFSSAVTKS FEDVNETVIK PHVQQWQSGE LSEETKRAAA QFGQKFQETS 300
SYGFQAFSNF TKNFNGNAED SSTAGNTTHT EYQKIDNNDK KNEQDEDKWD DF 352 
Gene Ontology
 GO:0005856; C:cytoskeleton; IPI:SGD.
 GO:0005793; C:endoplasmic reticulum-Golgi intermediate compartment; IPI:SGD.
 GO:0005768; C:endosome; IDA:SGD.
 GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
 GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
 GO:0048471; C:perinuclear region of cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005802; C:trans-Golgi network; IDA:SGD.
 GO:0003779; F:actin binding; IDA:SGD.
 GO:0008060; F:ARF GTPase activator activity; IDA:SGD.
 GO:0008270; F:zinc ion binding; IEA:InterPro.
 GO:0030037; P:actin filament reorganization involved in cell cycle; IMP:SGD.
 GO:0006888; P:ER to Golgi vesicle-mediated transport; IGI:SGD.
 GO:0043001; P:Golgi to plasma membrane protein transport; IMP:SGD.
 GO:0032312; P:regulation of ARF GTPase activity; IEA:InterPro.
 GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD. 
Interpro
 IPR001164; ArfGAP. 
Pfam
 PF01412; ArfGap 
SMART
 SM00105; ArfGap 
PROSITE
 PS50115; ARFGAP 
PRINTS
 PR00405; REVINTRACTNG.