CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009896
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Adenylate kinase 
Protein Synonyms/Alias
 AK; ATP-AMP transphosphorylase; ATP:AMP phosphotransferase; Adenylate monophosphate kinase 
Gene Name
 adk 
Gene Synonyms/Alias
 dnaW; plsA; b0474; JW0463 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
23QAQFIMEKYGIPQISacetylation[1]
40DMLRAAVKSGSELGKacetylation[1]
47KSGSELGKQAKDIMDacetylation[1]
47KSGSELGKQAKDIMDpupylation[2]
50SELGKQAKDIMDAGKacetylation[1]
50SELGKQAKDIMDAGKpupylation[2]
57KDIMDAGKLVTDELVacetylation[1]
69ELVIALVKERIAQEDacetylation[1]
136SGRVYHVKFNPPKVEacetylation[1]
136SGRVYHVKFNPPKVEpupylation[2]
141HVKFNPPKVEGKDDVacetylation[1]
141HVKFNPPKVEGKDDVpupylation[2]
145NPPKVEGKDDVTGEEacetylation[1]
184PLIGYYSKEAEAGNTacetylation[1]
192EAEAGNTKYAKVDGTacetylation[1, 3]
195AGNTKYAKVDGTKPVacetylation[1, 4]
200YAKVDGTKPVAEVRAacetylation[1]
211EVRADLEKILG****acetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618]
 [2] Reconstitution of the Mycobacterium tuberculosis pupylation pathway in Escherichia coli.
 Cerda-Maira FA, McAllister F, Bode NJ, Burns KE, Gygi SP, Darwin KH.
 EMBO Rep. 2011 Jul 8;12(8):863-70. [PMID: 21738222]
 [3] Lysine acetylation is a highly abundant and evolutionarily conserved modification in Escherichia coli.
 Zhang J, Sprung R, Pei J, Tan X, Kim S, Zhu H, Liu CF, Grishin NV, Zhao Y.
 Mol Cell Proteomics. 2009 Feb;8(2):215-25. [PMID: 18723842]
 [4] Comprehensive profiling of protein lysine acetylation in Escherichia coli.
 Zhang K, Zheng S, Yang JS, Chen Y, Cheng Z.
 J Proteome Res. 2013 Feb 1;12(2):844-51. [PMID: 23294111
Functional Description
 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. 
Sequence Annotation
 NP_BIND 10 15 ATP.
 NP_BIND 57 59 AMP.
 NP_BIND 85 88 AMP.
 NP_BIND 132 133 ATP.
 REGION 30 59 NMPbind.
 REGION 122 159 LID.
 BINDING 31 31 AMP.
 BINDING 36 36 AMP.
 BINDING 92 92 AMP.
 BINDING 119 119 ATP.
 BINDING 123 123 ATP.
 BINDING 156 156 AMP.
 BINDING 167 167 AMP.
 BINDING 200 200 ATP; via carbonyl oxygen.
 MOD_RES 192 192 N6-acetyllysine.  
Keyword
 3D-structure; Acetylation; ATP-binding; Complete proteome; Cytoplasm; Direct protein sequencing; Kinase; Nucleotide biosynthesis; Nucleotide-binding; Reference proteome; Transferase. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 214 AA 
Protein Sequence
MRIILLGAPG AGKGTQAQFI MEKYGIPQIS TGDMLRAAVK SGSELGKQAK DIMDAGKLVT 60
DELVIALVKE RIAQEDCRNG FLLDGFPRTI PQADAMKEAG INVDYVLEFD VPDELIVDRI 120
VGRRVHAPSG RVYHVKFNPP KVEGKDDVTG EELTTRKDDQ EETVRKRLVE YHQMTAPLIG 180
YYSKEAEAGN TKYAKVDGTK PVAEVRADLE KILG 214 
Gene Ontology
 GO:0005829; C:cytosol; IDA:EcoCyc.
 GO:0004017; F:adenylate kinase activity; IDA:EcoCyc.
 GO:0016208; F:AMP binding; IDA:EcoCyc.
 GO:0005524; F:ATP binding; IDA:EcoCyc.
 GO:0000287; F:magnesium ion binding; IDA:EcoCyc.
 GO:0006172; P:ADP biosynthetic process; IMP:EcoliWiki.
 GO:0044209; P:AMP salvage; IEA:UniProtKB-UniPathway.
 GO:0008654; P:phospholipid biosynthetic process; IMP:EcoliWiki.
 GO:0015951; P:purine ribonucleotide interconversion; IMP:EcoCyc.
 GO:0032774; P:RNA biosynthetic process; IMP:EcoliWiki.
 GO:0006412; P:translation; IMP:EcoliWiki. 
Interpro
 IPR006259; Adenyl_kin_sub.
 IPR000850; Adenylate_kin.
 IPR007862; Adenylate_kinase_lid-dom.
 IPR027417; P-loop_NTPase. 
Pfam
 PF00406; ADK
 PF05191; ADK_lid 
SMART
  
PROSITE
 PS00113; ADENYLATE_KINASE 
PRINTS
 PR00094; ADENYLTKNASE.