CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-009431
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Calmodulin 
Protein Synonyms/Alias
 CaM 
Gene Name
 Calm1; Calm2; Calm3 
Gene Synonyms/Alias
 Calm; Cam; Cam1; Cam2; Camb; Cam3; Camc 
Created Date
 July 27, 2013 
Organism
 Rattus norvegicus (Rat) 
NCBI Taxa ID
 10116 
Lysine Modification
Position
Peptide
Type
References
22EAFSLFDKDGDGTITubiquitination[1]
31GDGTITTKELGTVMRubiquitination[1]
78TMMARKMKDTDSEEEacetylation[2]
95EAFRVFDKDGNGYISubiquitination[1]
Reference
 [1] Synaptic protein ubiquitination in rat brain revealed by antibody-based ubiquitome analysis.
 Na CH, Jones DR, Yang Y, Wang X, Xu Y, Peng J.
 J Proteome Res. 2012 Sep 7;11(9):4722-32. [PMID: 22871113]
 [2] Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns.
 Lundby A, Lage K, Weinert BT, Bekker-Jensen DB, Secher A, Skovgaard T, Kelstrup CD, Dmytriyev A, Choudhary C, Lundby C, Olsen JV.
 Cell Rep. 2012 Aug 30;2(2):419-31. [PMID: 22902405
Functional Description
 Calmodulin mediates the control of a large number of enzymes, ion channels and other proteins by Ca(2+). Among the enzymes to be stimulated by the calmodulin-Ca(2+) complex are a number of protein kinases and phosphatases. Together with CEP110 and centrin, is involved in a genetic pathway that regulates the centrosome cycle and progression through cytokinesis (By similarity). 
Sequence Annotation
 DOMAIN 8 43 EF-hand 1.
 DOMAIN 44 79 EF-hand 2.
 DOMAIN 81 116 EF-hand 3.
 DOMAIN 117 149 EF-hand 4.
 MOD_RES 2 2 N-acetylalanine.
 MOD_RES 22 22 N6-acetyllysine; alternate (By
 MOD_RES 45 45 Phosphothreonine; by CaMK4.
 MOD_RES 95 95 N6-acetyllysine (By similarity).
 MOD_RES 100 100 Phosphotyrosine (By similarity).
 MOD_RES 102 102 Phosphoserine (By similarity).
 MOD_RES 116 116 N6,N6,N6-trimethyllysine.
 MOD_RES 139 139 Phosphotyrosine (By similarity).
 CROSSLNK 22 22 Glycyl lysine isopeptide (Lys-Gly)  
Keyword
 3D-structure; Acetylation; Calcium; Complete proteome; Cytoplasm; Cytoskeleton; Direct protein sequencing; Isopeptide bond; Metal-binding; Methylation; Phosphoprotein; Reference proteome; Repeat; Ubl conjugation. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 149 AA 
Protein Sequence
MADQLTEEQI AEFKEAFSLF DKDGDGTITT KELGTVMRSL GQNPTEAELQ DMINEVDADG 60
NGTIDFPEFL TMMARKMKDT DSEEEIREAF RVFDKDGNGY ISAAELRHVM TNLGEKLTDE 120
EVDEMIREAD IDGDGQVNYE EFVQMMTAK 149 
Gene Ontology
 GO:0005813; C:centrosome; IEA:Compara.
 GO:0005829; C:cytosol; TAS:Reactome.
 GO:0030426; C:growth cone; IDA:RGD.
 GO:0005654; C:nucleoplasm; TAS:Reactome.
 GO:0005886; C:plasma membrane; IDA:RGD.
 GO:0005876; C:spindle microtubule; IEA:Compara.
 GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
 GO:0008179; F:adenylate cyclase binding; IDA:RGD.
 GO:0005246; F:calcium channel regulator activity; NAS:RGD.
 GO:0005509; F:calcium ion binding; IDA:RGD.
 GO:0044325; F:ion channel binding; IDA:RGD.
 GO:0050998; F:nitric-oxide synthase binding; IDA:RGD.
 GO:0030235; F:nitric-oxide synthase regulator activity; IDA:RGD.
 GO:0047485; F:protein N-terminus binding; IMP:RGD.
 GO:0007190; P:activation of adenylate cyclase activity; IDA:RGD.
 GO:0019722; P:calcium-mediated signaling; IMP:RGD.
 GO:0051000; P:positive regulation of nitric-oxide synthase activity; IDA:RGD.
 GO:0032465; P:regulation of cytokinesis; IEA:Compara.
 GO:1901841; P:regulation of high voltage-gated calcium channel activity; IMP:RGD.
 GO:0060314; P:regulation of ryanodine-sensitive calcium-release channel activity; IDA:RGD.
 GO:1901339; P:regulation of store-operated calcium channel activity; IC:RGD.
 GO:0001975; P:response to amphetamine; IEP:RGD.
 GO:0051592; P:response to calcium ion; IEA:Compara.
 GO:0051412; P:response to corticosterone stimulus; IEP:RGD. 
Interpro
 IPR011992; EF-hand-like_dom.
 IPR018247; EF_Hand_1_Ca_BS.
 IPR002048; EF_hand_dom.
 IPR001125; Recoverin. 
Pfam
 PF13499; EF_hand_5 
SMART
 SM00054; EFh 
PROSITE
 PS00018; EF_HAND_1
 PS50222; EF_HAND_2 
PRINTS
 PR00450; RECOVERIN.