CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-005841
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Phosphomethylpyrimidine synthase 
Protein Synonyms/Alias
 Hydroxymethylpyrimidine phosphate synthase; HMP-P synthase; HMP-phosphate synthase; HMPP synthase; Thiamine biosynthesis protein ThiC 
Gene Name
 thiC 
Gene Synonyms/Alias
 b3994; JW3958 
Created Date
 July 27, 2013 
Organism
 Escherichia coli (strain K12) 
NCBI Taxa ID
 83333 
Lysine Modification
Position
Peptide
Type
References
31GTAFPNSKRIYITGTacetylation[1]
119VRSSDYTKARLADDGacetylation[1]
507EHLGLPNKEDVKQGLacetylation[1]
Reference
 [1] Acetyl-Phosphate Is a Critical Determinant of Lysine Acetylation in E. coli.
 Weinert BT, Iesmantavicius V, Wagner SA, Schölz C, Gummesson B, Beli P, Nyström T, Choudhary C.
 Mol Cell. 2013 Jul 25;51(2):265-72. [PMID: 23830618
Functional Description
 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction (Probable). 
Sequence Annotation
 REGION 353 355 Substrate binding (By similarity).
 REGION 394 397 Substrate binding (By similarity).
 METAL 437 437 Zinc (By similarity).
 METAL 501 501 Zinc (By similarity).
 METAL 581 581 Iron-sulfur (4Fe-4S-S-AdoMet) (By
 METAL 584 584 Iron-sulfur (4Fe-4S-S-AdoMet) (By
 METAL 589 589 Iron-sulfur (4Fe-4S-S-AdoMet) (By
 BINDING 239 239 Substrate (By similarity).
 BINDING 268 268 Substrate (By similarity).
 BINDING 297 297 Substrate (By similarity).
 BINDING 333 333 Substrate (By similarity).
 BINDING 433 433 Substrate (By similarity).
 BINDING 460 460 Substrate (By similarity).  
Keyword
 4Fe-4S; Complete proteome; Iron; Iron-sulfur; Lyase; Metal-binding; Reference proteome; S-adenosyl-L-methionine; Thiamine biosynthesis; Zinc. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 631 AA 
Protein Sequence
MSATKLTRRE QRARAQHFID TLEGTAFPNS KRIYITGTHP GVRVPMREIQ LSPTLIGGSK 60
EQPQYEENEA IPVYDTSGPY GDPQIAINVQ QGLAKLRQPW IDARGDTEEL TVRSSDYTKA 120
RLADDGLDEL RFSGVLTPKR AKAGRRVTQL HYARQGIITP EMEFIAIREN MGRERIRSEV 180
LRHQHPGMSF GAHLPENITA EFVRDEVAAG RAIIPANINH PESEPMIIGR NFLVKVNANI 240
GNSAVTSSIE EEVEKLVWST RWGADTVMDL STGRYIHETR EWILRNSPVP IGTVPIYQAL 300
EKVNGIAEDL TWEAFRDTLL EQAEQGVDYF TIHAGVLLRY VPMTAKRLTG IVSRGGSIMA 360
KWCLSHHQEN FLYQHFREIC EICAAYDVSL SLGDGLRPGS IQDANDEAQF AELHTLGELT 420
KIAWEYDVQV MIEGPGHVPM QMIRRNMTEE LEHCHEAPFY TLGPLTTDIA PGYDHFTSGI 480
GAAMIGWFGC AMLCYVTPKE HLGLPNKEDV KQGLITYKIA AHAADLAKGH PGAQIRDNAM 540
SKARFEFRWE DQFNLALDPF TARAYHDETL PQESGKVAHF CSMCGPKFCS MKISQEVRDY 600
AATQTIEMGM ADMSENFRAR GGEIYLRKEE A 631 
Gene Ontology
 GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.
 GO:0016829; F:lyase activity; IEA:HAMAP.
 GO:0008270; F:zinc ion binding; IEA:HAMAP.
 GO:0009228; P:thiamine biosynthetic process; IEA:HAMAP.
 GO:0009229; P:thiamine diphosphate biosynthetic process; IEA:UniProtKB-UniPathway. 
Interpro
 IPR002817; ThiC.
 IPR025747; ThiC-associated_dom. 
Pfam
 PF01964; ThiC
 PF13667; ThiC-associated 
SMART
  
PROSITE
  
PRINTS