CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-031326
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 2-hydroxyacyl-CoA lyase 1 
Protein Synonyms/Alias
 cDNA FLJ53672, highly similar to 2-hydroxyphytanoyl-CoA lyase (EC 4.1.-.-) 
Gene Name
 HACL1 
Gene Synonyms/Alias
  
Created Date
 July 27, 2013 
Organism
 Homo sapiens (Human) 
NCBI Taxa ID
 9606 
Lysine Modification
Position
Peptide
Type
References
109EACRLYTKFSARPSSubiquitination[1]
126AIPFVIEKAVRSSIYubiquitination[1, 2, 3]
187ASVIRNAKQPLLIIGubiquitination[1, 2]
214KKLVEQYKLPFLPTPubiquitination[1, 2]
224FLPTPMGKGVVPDNHubiquitination[1]
Reference
 [1] Refined preparation and use of anti-diglycine remnant (K-ε-GG) antibody enables routine quantification of 10,000s of ubiquitination sites in single proteomics experiments.
 Udeshi ND, Svinkina T, Mertins P, Kuhn E, Mani DR, Qiao JW, Carr SA.
 Mol Cell Proteomics. 2013 Mar;12(3):825-31. [PMID: 23266961]
 [2] Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization.
 Sarraf SA, Raman M, Guarani-Pereira V, Sowa ME, Huttlin EL, Gygi SP, Harper JW.
 Nature. 2013 Apr 18;496(7445):372-6. [PMID: 23503661]
 [3] Integrated proteomic analysis of post-translational modifications by serial enrichment.
 Mertins P, Qiao JW, Patel J, Udeshi ND, Clauser KR, Mani DR, Burgess MW, Gillette MA, Jaffe JD, Carr SA.
 Nat Methods. 2013 Jul;10(7):634-7. [PMID: 23749302
Functional Description
  
Sequence Annotation
  
Keyword
 Complete proteome; Lyase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 551 AA 
Protein Sequence
MPDSNFAERS EEQVSGAKVI AQALKTQDVE YIFGIVGIPV TEIAIAAQQL GIKYIGMRNE 60
QAACYAASAI GYLTSRPLLV IGGSSERNQE TMGAFQEFPQ VEACRLYTKF SARPSSIEAI 120
PFVIEKAVRS SIYGRPGACY VDIPADFVNL QVNVNSIKYM ERCMSPPISM AETSAVCTAA 180
SVIRNAKQPL LIIGKGAAYA HAEESIKKLV EQYKLPFLPT PMGKGVVPDN HPYCVGAARS 240
RALQFADVIV LFGARLNWIL HFGLPPRYQP DVKFIQVDIC AEELGNNVKP AVTLLGNIHA 300
VTKQLLEELD KTPWQYPPES KWWKTLREKM KSNEAASKEL ASKKSLPMNY YTVFYHVQEQ 360
LPRDCFVVSE GANTMDIGRT VLQNYLPRHR LDAGTFGTMG VGLGFAIAAA VVAKDRSPGQ 420
WIICVEGDSA FGFSGMEVET ICRYNLPIIL LVVNNNGIYQ GFDTDTWKEM LKFQDATAVV 480
PPMCLLPNSH YEQVMTAFGG KGYFVQTPEE LQKSLRQSLA DTTKPSLINI MIEPQATRKA 540
QDFHWLTRSN M 551 
Gene Ontology
 GO:0016829; F:lyase activity; IEA:UniProtKB-KW.
 GO:0000287; F:magnesium ion binding; IEA:InterPro.
 GO:0030976; F:thiamine pyrophosphate binding; IEA:InterPro.
 GO:0008152; P:metabolic process; IEA:GOC. 
Interpro
 IPR012000; Thiamin_PyroP_enz_cen_dom.
 IPR012001; Thiamin_PyroP_enz_TPP-bd_dom.
 IPR011766; TPP_enzyme-bd_C. 
Pfam
 PF02775; TPP_enzyme_C
 PF00205; TPP_enzyme_M
 PF02776; TPP_enzyme_N 
SMART
  
PROSITE
  
PRINTS