CPLM 1.0 - Compendium of Protein Lysine Modification
TagContent
CPLM ID CPLM-016423
UniProt Accession
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
 Aldehyde dehydrogenase family 8 member A1 
Protein Synonyms/Alias
 Retinal dehydrogenase 4 
Gene Name
 Aldh8a1 
Gene Synonyms/Alias
 Raldh4 
Created Date
 July 27, 2013 
Organism
 Mus musculus (Mouse) 
NCBI Taxa ID
 10090 
Lysine Modification
Position
Peptide
Type
References
38STGEVYCKVPNSGKEubiquitination[1]
44CKVPNSGKEEIEAAVubiquitination[1]
93ELAQAESKDQGKTLTubiquitination[1]
196MFCKLLDKAGVPPGVubiquitination[1]
248QLSAPHCKKLSLELGubiquitination[1]
249LSAPHCKKLSLELGGubiquitination[1]
305SIYSEFLKRFVEATRacetylation[2, 3]
315VEATRKWKVGVPSDPubiquitination[1]
332NMGALISKAHLEKVRubiquitination[1]
344KVRSYVLKAQTEGARacetylation[4, 5]
344KVRSYVLKAQTEGARubiquitination[1]
382PTVITDIKDESRCMTubiquitination[1]
426LAATVWSKDVGRIHRubiquitination[1]
461NLPFGGMKSSGIGREubiquitination[1]
471GIGREGAKDSYDFFTubiquitination[1]
Reference
 [1] Proteomic analyses reveal divergent ubiquitylation site patterns in murine tissues.
 Wagner SA, Beli P, Weinert BT, Schölz C, Kelstrup CD, Young C, Nielsen ML, Olsen JV, Brakebusch C, Choudhary C.
 Mol Cell Proteomics. 2012 Dec;11(12):1578-85. [PMID: 22790023]
 [2] Calorie restriction and SIRT3 trigger global reprogramming of the mitochondrial protein acetylome.
 Hebert AS, Dittenhafer-Reed KE, Yu W, Bailey DJ, Selen ES, Boersma MD, Carson JJ, Tonelli M, Balloon AJ, Higbee AJ, Westphall MS, Pagliarini DJ, Prolla TA, Assadi-Porter F, Roy S, Denu JM, Coon JJ.
 Mol Cell. 2013 Jan 10;49(1):186-99. [PMID: 23201123]
 [3] Quantification of mitochondrial acetylation dynamics highlights prominent sites of metabolic regulation.
 Still AJ, Floyd BJ, Hebert AS, Bingman CA, Carson JJ, Gunderson DR, Dolan BK, Grimsrud PA, Dittenhafer-Reed KE, Stapleton DS, Keller MP, Westphall MS, Denu JM, Attie AD, Coon JJ, Pagliarini DJ.
 J Biol Chem. 2013 Jul 17;. [PMID: 23864654]
 [4] Quantitative assessment of the impact of the gut microbiota on lysine epsilon-acetylation of host proteins using gnotobiotic mice.
 Simon GM, Cheng J, Gordon JI.
 Proc Natl Acad Sci U S A. 2012 Jul 10;109(28):11133-8. [PMID: 22733758]
 [5] Circadian acetylome reveals regulation of mitochondrial metabolic pathways.
 Masri S, Patel VR, Eckel-Mahan KL, Peleg S, Forne I, Ladurner AG, Baldi P, Imhof A, Sassone-Corsi P.
 Proc Natl Acad Sci U S A. 2013 Feb 26;110(9):3339-44. [PMID: 23341599
Functional Description
 Converts 9-cis-retinal to 9-cis-retinoic acid. Has lower activity towards 13-cis-retinal. Has much lower activity towards all-trans-retinal. Has a preference for NAD, but shows considerable activity with NADP (in vitro) (By similarity). 
Sequence Annotation
 NP_BIND 231 236 NAD (By similarity).
 ACT_SITE 253 253 Proton acceptor (By similarity).
 ACT_SITE 287 287 Nucleophile (By similarity).  
Keyword
 Complete proteome; Cytoplasm; NAD; Oxidoreductase; Reference proteome. 
Sequence Source
 UniProt (SWISSPROT/TrEMBL); GenBank; EMBL 
Protein Length
 487 AA 
Protein Sequence
MAGKRELLML ENFIGGKFLP CNSYIDSYDP STGEVYCKVP NSGKEEIEAA VEAAREAFPA 60
WSSRSPQERS LVLNRLADVL EQSLEELAQA ESKDQGKTLT LARTMDIPRS VLNFRFFASS 120
NLHHVSECTQ MSHLGCMHYT VRTPVGIAGL ISPWNLPLYL LTWKIAPAIA AGNTVIAKPS 180
EMTSVTAWMF CKLLDKAGVP PGVINIVFGT GPRVGEALVS HPEVPLISFT GSQPTAERIT 240
QLSAPHCKKL SLELGGKNPA IIFEDANLEE CIPATVRSSF ANQGEICLCT SRIFVQRSIY 300
SEFLKRFVEA TRKWKVGVPS DPSANMGALI SKAHLEKVRS YVLKAQTEGA RILCGEGVDQ 360
LSLPLRNQAG YFMLPTVITD IKDESRCMTE EIFGPVTCVV PFDSEEEVIT RANSVRYGLA 420
ATVWSKDVGR IHRVAKKLQS GLVWTNCWLI RELNLPFGGM KSSGIGREGA KDSYDFFTEI 480
KTITIKY 487 
Gene Ontology
 GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
 GO:0005622; C:intracellular; ISS:UniProtKB.
 GO:0001758; F:retinal dehydrogenase activity; ISS:UniProtKB.
 GO:0042904; P:9-cis-retinoic acid biosynthetic process; IDA:MGI.
 GO:0042574; P:retinal metabolic process; ISS:UniProtKB. 
Interpro
 IPR016161; Ald_DH/histidinol_DH.
 IPR016163; Ald_DH_C.
 IPR016160; Ald_DH_CS.
 IPR016162; Ald_DH_N.
 IPR015590; Aldehyde_DH_dom. 
Pfam
 PF00171; Aldedh 
SMART
  
PROSITE
 PS00070; ALDEHYDE_DEHYDR_CYS
 PS00687; ALDEHYDE_DEHYDR_GLU 
PRINTS